CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045513_P001	Maize	cytosol, mitochondrion	82.71	89.13
Zm00001d035999_P002	Maize	mitochondrion	79.83	87.66
Os06t0126500-01	Rice	cytosol	80.98	82.89
TraesCS7A01G055400.1	Wheat	mitochondrion	68.3	68.7
TraesCS4A01G442100.1	Wheat	mitochondrion	68.59	67.81
HORVU7Hr1G010230.1	Barley	mitochondrion	69.74	67.79
TraesCS7D01G050300.1	Wheat	cytosol	65.42	67.16
GSMUA_Achr3P12380_001	Banana	cytosol	45.53	57.88
GSMUA_Achr1P07950_001	Banana	cytosol	47.26	55.22
GSMUA_Achr3P14600_001	Banana	cytosol	46.69	54.92
EES14129	Sorghum	cytosol	51.59	54.41
KXG36034	Sorghum	cytosol	51.59	53.92
GSMUA_Achr1P18860_001	Banana	cytosol	43.52	53.17
GSMUA_Achr4P19700_001	Banana	cytosol	38.04	51.56
GSMUA_Achr7P05880_001	Banana	cytosol	47.55	50.46
KRH09137	Soybean	cytosol	38.33	43.32
KRH38607	Soybean	cytosol	42.36	43.24
VIT_16s0100g00470.t01	Wine grape	cytosol	42.07	42.57
CDX98996	Canola	cytosol	37.46	42.48
KRH09139	Soybean	cytosol, plastid	43.23	42.37
CDX70017	Canola	cytosol	37.46	42.35
Bra009283.1-P	Field mustard	cytosol, plastid	37.46	42.35
Solyc03g026220.2.1	Tomato	cytosol	41.21	41.94
PGSC0003DMT400065070	Potato	cytosol	40.06	41.87
Solyc06g035720.2.1	Tomato	cytosol	39.77	41.82
KRH38609	Soybean	cytosol, plastid	42.36	41.64
KRH03982	Soybean	cytosol	32.85	41.61
AT5G07220.1	Thale cress	cytosol	36.31	41.58
Solyc08g080320.2.1	Tomato	cytosol, plastid	32.85	41.3
CDY38897	Canola	cytosol	38.9	41.16
Bra029142.1-P	Field mustard	cytosol	38.9	41.16
CDY68101	Canola	cytosol	38.62	41.1
KRH57254	Soybean	cytosol	32.56	41.09
PGSC0003DMT400058588	Potato	cytosol	33.14	40.64
PGSC0003DMT400037124	Potato	cytosol	39.77	40.47
AT5G52060.1	Thale cress	cytosol	39.48	40.06
EES01703	Sorghum	cytosol	29.68	39.77
CDY67495	Canola	cytosol	37.18	39.45
CDY30692	Canola	cytosol	33.72	39.39
CDY30694	Canola	cytosol	33.72	39.39
Bra029288.1-P	Field mustard	cytosol	33.43	39.06
CDY27085	Canola	cytosol	36.02	38.23
EES11441	Sorghum	cytosol	29.68	37.87
AT5G62100.1	Thale cress	cytosol	31.99	37.5
Bra022577.1-P	Field mustard	cytosol	37.18	36.86
EES11013	Sorghum	mitochondrion	15.85	33.95
KRH44514	Soybean	cytosol, plastid	18.16	33.87
EES05371	Sorghum	mitochondrion	15.56	33.54
KRH35375	Soybean	cytosol	25.94	33.33
EES11012	Sorghum	mitochondrion	14.41	31.65
EES14399	Sorghum	cytosol	14.12	31.21
OQU88071	Sorghum	mitochondrion	14.12	30.43
OQU80203	Sorghum	mitochondrion	10.09	22.88

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	EntrezGene:8068368	InterPro:BAG_dom_sf	InterPro:BAG_domain
UniProt:C5Z2X4	EnsemblPlants:EER87751	ProteinID:EER87751	ProteinID:EER87751.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	PFAM:PF00240
PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF20	SMART:SM00213
SMART:SM00264	EnsemblPlantsGene:SORBI_3010G016300	SUPFAM:SSF54236	SUPFAM:SSF63491	unigene:Sbi.7547	UniParc:UPI0001A8959B
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	RefSeq:XP_002436384.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:1293948..1296556

Molecular Weight (calculated)

37198.5 Da

IEP (calculated)

10.362

GRAVY (calculated)

-0.550

Length

347 amino acids

Sequence
(BLAST)

001: MLGASPKSRK GAAVKLGSMK EVPAPAVAVA AAGGGGNGGK VPAEEVWEVR PGGMLVQKRG GIGGGAGDDE PSPNVKPVPT IRVKVKHAGV THEIYISSEA
101: SFGELKKLVA AKTGLHPDDQ KVLYKDKERD SKAFLDMAGV KDRSKVVVVE DPEARARRLI EERRNGHLEK AARAVAAVTA EVDKLAPKVA ALDASVRKGE
201: KVAENDVVQV TELLMNELLK LDAVVADGDV KAQRRMQVKR VQKYVETLDA VAAKNAAIIR KSSEKAAAKP APPPPQQYHQ PRHQPPPQQQ QQQPRHQHHQ
301: QQQGPTRWEM FDLLSSLPST SSASSTTTVS STASSGAPPT NRLDWML

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.