CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14399	Sorghum	cytosol	57.52	56.05
OQU88071	Sorghum	mitochondrion	50.98	48.45
Zm00001d012109_P001	Maize	mitochondrion	48.37	44.58
TraesCS3A01G390600.1	Wheat	mitochondrion	46.41	43.83
PGSC0003DMT400017936	Potato	mitochondrion	35.95	43.31
HORVU3Hr1G081400.3	Barley	mitochondrion	46.41	43.29
TraesCS3A01G390400.1	Wheat	mitochondrion	45.75	43.21
TraesCS3B01G422400.1	Wheat	mitochondrion	45.75	43.21
TraesCS3D01G383000.1	Wheat	mitochondrion	46.41	43.03
TraesCS3D01G382800.1	Wheat	mitochondrion	46.41	43.03
TraesCS3A01G390500.1	Wheat	mitochondrion	46.41	43.03
TraesCS3D01G383200.1	Wheat	mitochondrion	45.75	42.94
TraesCS3D01G382600.1	Wheat	mitochondrion	45.1	42.59
TraesCS3D01G382700.1	Wheat	mitochondrion	45.1	42.33
TraesCS3A01G390300.1	Wheat	mitochondrion	44.44	41.98
TraesCS3B01G422300.1	Wheat	mitochondrion	44.44	41.98
GSMUA_AchrUn_...	Banana	cytosol	41.18	41.72
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	40.52	40.79
VIT_14s0219g00210.t01	Wine grape	cytosol	38.56	40.14
EES05371	Sorghum	mitochondrion	41.83	39.75
EES11012	Sorghum	mitochondrion	40.52	39.24
KRG93982	Soybean	cytosol, mitochondrion	40.52	38.99
Os01t0907200-00	Rice	mitochondrion	49.67	38.78
KRG94376	Soybean	cytosol, mitochondrion	38.56	37.82
EES11013	Sorghum	mitochondrion	39.87	37.65
KRH07081	Soybean	cytosol, mitochondrion	38.56	37.58
CDX91068	Canola	cytosol, mitochondrion	37.25	35.4
CDX85601	Canola	cytosol, mitochondrion	36.6	35.0
Solyc02g093610.2.1	Tomato	mitochondrion	34.64	34.64
Bra023460.1-P	Field mustard	cytosol, mitochondrion	35.95	34.38
PGSC0003DMT400032912	Potato	mitochondrion	34.64	33.97
AT5G14360.1	Thale cress	cytosol, mitochondrion	35.95	33.74
CDX70560	Canola	cytosol, mitochondrion	35.95	33.74
Bra006251.1-P	Field mustard	cytosol, mitochondrion	35.95	33.74
CDY09848	Canola	cytosol	28.1	32.33
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	32.03	30.25
CDY36367	Canola	plastid	32.03	30.25
CDY70267	Canola	cytosol, mitochondrion, plastid	32.03	30.25
CDX78574	Canola	cytosol, mitochondrion	32.68	30.12
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	32.03	29.7
EES01703	Sorghum	cytosol	31.37	18.53
EES11441	Sorghum	cytosol	28.1	15.81
EES14129	Sorghum	cytosol	24.84	11.55
KXG36034	Sorghum	cytosol	24.84	11.45
EER87751	Sorghum	cytosol	22.88	10.09

Protein Annotations

EnsemblPlants:OQU80203	EnsemblPlantsGene:SORBI_3007G093201	Gene3D:3.10.20.90	InterPro:Ubiquitin-like_domsf	PANTHER:PTHR10666	PANTHER:PTHR10666:SF115
ProteinID:OQU80203	ProteinID:OQU80203.1	SEG:seg	SUPFAM:SSF54236	UniParc:UPI000B8BA050	UniProt:A0A1Z5R8V9
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:16431466..16433229

Molecular Weight (calculated)

17192.9 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.126

Length

153 amino acids

Sequence
(BLAST)

001: MVKILSPRRL FRSRSRSTNI SGGSVNICAL KWRSPEDDAA AVEYILMIVS TGSWWHDVSI HATGTFGDQK VMLLLGTGLW PSEQRLLFMG KESDNCEHLH
101: MVGVQDKDKL LLLEDLAVKE RKFSLYLHCW TGISTGREGP VAPVPEPVLP FRD

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.