CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023460.1-P	Field mustard	cytosol, mitochondrion	99.38	99.38
CDX91068	Canola	cytosol, mitochondrion	98.75	98.14
CDX70560	Canola	cytosol, mitochondrion	92.5	90.8
AT5G14360.1	Thale cress	cytosol, mitochondrion	91.88	90.18
CDX78574	Canola	cytosol, mitochondrion	88.75	85.54
CDY09848	Canola	cytosol	70.0	84.21
VIT_14s0219g00210.t01	Wine grape	cytosol	58.75	63.95
PGSC0003DMT400017936	Potato	mitochondrion	47.5	59.84
KRH07081	Soybean	cytosol, mitochondrion	58.12	59.24
KRG94376	Soybean	cytosol, mitochondrion	57.5	58.97
KRG93982	Soybean	cytosol, mitochondrion	56.25	56.6
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	50.62	53.29
GSMUA_AchrUn_...	Banana	cytosol	49.38	52.32
Solyc02g093610.2.1	Tomato	mitochondrion	50.0	52.29
Zm00001d050988_P001	Maize	mitochondrion	46.88	51.37
PGSC0003DMT400032912	Potato	mitochondrion	50.0	51.28
EES05371	Sorghum	mitochondrion	51.25	50.93
CDY36367	Canola	plastid	51.25	50.62
CDY70267	Canola	cytosol, mitochondrion, plastid	51.25	50.62
TraesCS6D01G194400.1	Wheat	mitochondrion	50.62	50.31
Os02t0597700-00	Rice	mitochondrion	52.5	50.0
HORVU6Hr1G053980.1	Barley	mitochondrion	50.0	50.0
TraesCS6B01G240800.1	Wheat	mitochondrion	50.62	49.39
TraesCS6A01G211300.1	Wheat	mitochondrion	48.12	48.73
Zm00001d017107_P001	Maize	mitochondrion	50.0	48.48
EES11012	Sorghum	mitochondrion	46.88	47.47
EES11013	Sorghum	mitochondrion	47.5	46.91
TraesCS2D01G341100.1	Wheat	mitochondrion	48.75	46.15
OQU88071	Sorghum	mitochondrion	46.25	45.96
TraesCS2D01G340900.1	Wheat	mitochondrion	48.75	45.88
Zm00001d042449_P001	Maize	mitochondrion	46.88	45.73
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	48.12	45.56
TraesCS2A01G321700.1	Wheat	mitochondrion	48.12	45.56
HORVU2Hr1G083660.1	Barley	plastid	48.12	45.29
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	47.5	44.97
Zm00001d003264_P001	Maize	mitochondrion	46.88	44.91
TraesCS3A01G390600.1	Wheat	mitochondrion	45.0	44.44
TraesCS2B01G360600.1	Wheat	mitochondrion	47.5	44.44
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	46.88	44.38
TraesCS2A01G322100.1	Wheat	mitochondrion	46.88	44.12
HORVU3Hr1G081400.3	Barley	mitochondrion	45.0	43.9
TraesCS2A01G321800.1	Wheat	mitochondrion	46.88	43.86
TraesCS3B01G422400.1	Wheat	mitochondrion	44.38	43.83
TraesCS3A01G390300.1	Wheat	mitochondrion	43.75	43.21
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	46.88	43.1
TraesCS3D01G382600.1	Wheat	mitochondrion	43.12	42.59
TraesCS3B01G422300.1	Wheat	mitochondrion	43.12	42.59
TraesCS3D01G383000.1	Wheat	mitochondrion	43.75	42.42
TraesCS3D01G382700.1	Wheat	mitochondrion	43.12	42.33
TraesCS3D01G383200.1	Wheat	mitochondrion	43.12	42.33
Zm00001d012109_P001	Maize	mitochondrion	43.75	42.17
TraesCS3D01G382800.1	Wheat	mitochondrion	43.12	41.82
TraesCS3A01G390400.1	Wheat	mitochondrion	41.88	41.36
TraesCS3A01G390500.1	Wheat	mitochondrion	42.5	41.21
Os01t0907200-00	Rice	mitochondrion	45.62	37.24
OQU80203	Sorghum	mitochondrion	35.0	36.6
EES14399	Sorghum	cytosol	34.38	35.03
HORVU2Hr1G083700.4	Barley	plastid	48.75	33.77
CDX78039	Canola	cytosol	28.12	17.24
CDX90634	Canola	cytosol	23.12	16.82
CDX73692	Canola	cytosol	27.5	16.67
CDY29046	Canola	cytosol	22.5	15.72
CDY30692	Canola	cytosol	28.75	15.49
CDY30694	Canola	cytosol	28.75	15.49
CDX98996	Canola	cytosol	29.38	15.36
CDX70017	Canola	cytosol	29.38	15.31
CDY38897	Canola	cytosol	30.62	14.94
CDY68101	Canola	cytosol	30.0	14.72
CDY67495	Canola	cytosol	30.0	14.68
CDY27085	Canola	cytosol	29.38	14.37

Protein Annotations

EnsemblPlants:CDX85601	EnsemblPlantsGene:GSBRNA2T00143325001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF91	PFAM:PF00240
PFscan:PS50053	ProteinID:CDX85601	ProteinID:CDX85601.1	SEG:seg	SMART:SM00213	SUPFAM:SSF54236
UniParc:UPI0004EF4224	MapMan:35.2	:	:	:	:

Description

BnaA02g02120D

Coordinates

chrLK031842:-:839173..840222

Molecular Weight (calculated)

18228.0 Da

IEP (calculated)

9.972

GRAVY (calculated)

-0.587

Length

160 amino acids

Sequence
(BLAST)

001: MMKFKSKRFG IRFGFGKRTN NKGTQQDQQQ KGFGNNNNSS SSNYEIKWEL RPGGMLVQKR QESIGEDLIS IRVSTFAHFH DLSIEATSTF GELKMVLALL
101: TGLEPKQQRL LFKGKEREDD EYLHMVGVGE KDKVLLLEDP AFKEKKLLNN ISTSCPTIIV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.