Factsheet for TraesCS2D01G340900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G360600.1	Wheat	mitochondrion	94.12	93.57
TraesCS2A01G322100.1	Wheat	mitochondrion	93.53	93.53
TraesCS2D01G341100.1	Wheat	mitochondrion	92.94	93.49
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	91.76	92.31
EES11012	Sorghum	mitochondrion	76.47	82.28
EES11013	Sorghum	mitochondrion	75.88	79.63
TraesCS6D01G194400.1	Wheat	mitochondrion	67.06	70.81
Zm00001d003264_P001	Maize	mitochondrion	69.41	70.66
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	61.18	68.42
GSMUA_AchrUn_...	Banana	cytosol	57.06	64.24
VIT_14s0219g00210.t01	Wine grape	cytosol	53.53	61.9
PGSC0003DMT400017936	Potato	mitochondrion	42.35	56.69
Solyc02g093610.2.1	Tomato	mitochondrion	50.59	56.21
PGSC0003DMT400032912	Potato	mitochondrion	51.18	55.77
TraesCS3D01G382700.1	Wheat	mitochondrion	52.35	54.6
TraesCS3D01G383200.1	Wheat	mitochondrion	52.35	54.6
TraesCS3D01G382600.1	Wheat	mitochondrion	51.76	54.32
KRG93982	Soybean	cytosol, mitochondrion	50.59	54.09
TraesCS3D01G383000.1	Wheat	mitochondrion	52.35	53.94
KRH07081	Soybean	cytosol, mitochondrion	49.41	53.5
TraesCS3D01G382800.1	Wheat	mitochondrion	51.76	53.33
KRG94376	Soybean	cytosol, mitochondrion	48.24	52.56
CDX85601	Canola	cytosol, mitochondrion	45.88	48.75
AT5G14360.1	Thale cress	cytosol, mitochondrion	46.47	48.47
CDX91068	Canola	cytosol, mitochondrion	45.88	48.45
Bra023460.1-P	Field mustard	cytosol, mitochondrion	45.29	48.12
Bra006251.1-P	Field mustard	cytosol, mitochondrion	45.88	47.85
CDX70560	Canola	cytosol, mitochondrion	45.88	47.85
CDY70267	Canola	cytosol, mitochondrion, plastid	42.94	45.06
CDY36367	Canola	plastid	42.94	45.06
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	42.94	45.06
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	42.94	44.24
CDX78574	Canola	cytosol, mitochondrion	42.94	43.98
CDY09848	Canola	cytosol	29.41	37.59
TraesCS2D01G464700.1	Wheat	cytosol	32.94	20.82
TraesCS3D01G344700.1	Wheat	cytosol	31.76	20.15
TraesCS7D01G270100.1	Wheat	cytosol	32.35	17.03
TraesCS7D01G050300.1	Wheat	cytosol	31.76	15.98
TraesCS5D01G319300.2	Wheat	cytosol	30.59	14.81

Protein Annotations

EnsemblPlants:TraesCS2D01G340900.1	EnsemblPlantsGene:TraesCS2D01G340900	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF178	PFAM:PF00240
PFscan:PS50053	SEG:seg	SUPFAM:SSF54236	TIGR:cd01812	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:+:435196762..435197822

Molecular Weight (calculated)

18607.4 Da

IEP (calculated)

9.776

GRAVY (calculated)

-0.418

Length

170 amino acids

Sequence
(BLAST)

001: MMKLRCPNPK RLFRRSSSKM SRSSSSCSSS SDNGSDASGG IRGGGGSGEI EWEVRPGGML VQRRDGRGDV EIITVRVATG HSWHEVSIGA TCTFGELKVV
101: VSMVTGLEPR EQRLLFRGKE REDSDHLHMV GVRDKDKVLL LEDPALKDIK LQAALAAQAV QSPYHTFIKV

Best Arabidopsis Sequence Match ( AT5G40630.1 )
(BLAST)

001: MGKLMAKRFC IGFGCGRIGT GNNKRSSSSS SSSSSFSSLS SSSSSSSSSC NNNNIKWEMR PGGMLVQKRS EDSNTEDLIS LRVSTVSQLS YEISIDANST
101: FGELKMMIAI VSGIEAKEQR LLFRGKERED REYLHMIGVG DGDKVFLLQD PAFKELKHIH LPITV

Arabidopsis Description

AT5G40630 protein [Source:UniProtKB/TrEMBL;Acc:Q9FM35]
SUBAcon: [cytosol,plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.