Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85601 | Canola | cytosol, mitochondrion | 90.18 | 91.88 |
| Bra023460.1-P | Field mustard | cytosol, mitochondrion | 89.57 | 91.25 |
| CDX91068 | Canola | cytosol, mitochondrion | 89.57 | 90.68 |
| Bra006251.1-P | Field mustard | cytosol, mitochondrion | 88.34 | 88.34 |
| CDX70560 | Canola | cytosol, mitochondrion | 88.34 | 88.34 |
| CDX78574 | Canola | cytosol, mitochondrion | 84.66 | 83.13 |
| CDY09848 | Canola | cytosol | 63.8 | 78.2 |
| VIT_14s0219g00210.t01 | Wine grape | cytosol | 56.44 | 62.59 |
| PGSC0003DMT400017936 | Potato | mitochondrion | 46.63 | 59.84 |
| KRH07081 | Soybean | cytosol, mitochondrion | 55.83 | 57.96 |
| KRG93982 | Soybean | cytosol, mitochondrion | 55.21 | 56.6 |
| KRG94376 | Soybean | cytosol, mitochondrion | 53.99 | 56.41 |
| Solyc02g093610.2.1 | Tomato | mitochondrion | 48.47 | 51.63 |
| Zm00001d050988_P001 | Maize | mitochondrion | 46.01 | 51.37 |
| GSMUA_Achr6P06780_001 | Banana | cytosol, mitochondrion | 47.85 | 51.32 |
| EES05371 | Sorghum | mitochondrion | 49.69 | 50.31 |
| TraesCS6D01G194400.1 | Wheat | mitochondrion | 49.69 | 50.31 |
| PGSC0003DMT400032912 | Potato | mitochondrion | 47.85 | 50.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.01 | 49.67 |
| Os02t0597700-00 | Rice | mitochondrion | 50.92 | 49.4 |
| TraesCS6B01G240800.1 | Wheat | mitochondrion | 49.69 | 49.39 |
| HORVU6Hr1G053980.1 | Barley | mitochondrion | 48.47 | 49.38 |
| TraesCS6A01G211300.1 | Wheat | mitochondrion | 47.24 | 48.73 |
| Zm00001d017107_P001 | Maize | mitochondrion | 49.08 | 48.48 |
| AT5G40630.1 | Thale cress | cytosol, mitochondrion, plastid | 49.08 | 48.48 |
| EES11012 | Sorghum | mitochondrion | 46.63 | 48.1 |
| EES11013 | Sorghum | mitochondrion | 46.63 | 46.91 |
| TraesCS2D01G341100.1 | Wheat | mitochondrion | 48.47 | 46.75 |
| TraesCS2D01G340900.1 | Wheat | mitochondrion | 48.47 | 46.47 |
| TraesCS2A01G321900.1 | Wheat | cytosol, mitochondrion, plastid | 47.85 | 46.15 |
| TraesCS2A01G321700.1 | Wheat | mitochondrion | 47.85 | 46.15 |
| HORVU2Hr1G083660.1 | Barley | plastid | 47.85 | 45.88 |
| HORVU2Hr1G083680.2 | Barley | cytosol, mitochondrion, plastid | 47.24 | 45.56 |
| TraesCS2B01G360600.1 | Wheat | mitochondrion | 47.24 | 45.03 |
| TraesCS2B01G360700.1 | Wheat | cytosol, mitochondrion | 46.63 | 44.97 |
| Zm00001d003264_P001 | Maize | mitochondrion | 46.01 | 44.91 |
| OQU88071 | Sorghum | mitochondrion | 44.17 | 44.72 |
| TraesCS2A01G322100.1 | Wheat | mitochondrion | 46.63 | 44.71 |
| Zm00001d042449_P001 | Maize | mitochondrion | 44.79 | 44.51 |
| TraesCS2A01G321800.1 | Wheat | mitochondrion | 46.63 | 44.44 |
| TraesCS2A01G322000.1 | Wheat | cytosol, mitochondrion, plastid | 46.63 | 43.68 |
| TraesCS3A01G390600.1 | Wheat | mitochondrion | 42.94 | 43.21 |
| HORVU3Hr1G081400.3 | Barley | mitochondrion | 42.94 | 42.68 |
| TraesCS3B01G422400.1 | Wheat | mitochondrion | 42.33 | 42.59 |
| TraesCS3A01G390300.1 | Wheat | mitochondrion | 41.72 | 41.98 |
| TraesCS3D01G383000.1 | Wheat | mitochondrion | 42.33 | 41.82 |
| TraesCS3D01G383200.1 | Wheat | mitochondrion | 41.72 | 41.72 |
| Zm00001d012109_P001 | Maize | mitochondrion | 42.33 | 41.57 |
| TraesCS3B01G422300.1 | Wheat | mitochondrion | 41.1 | 41.36 |
| TraesCS3D01G382600.1 | Wheat | mitochondrion | 41.1 | 41.36 |
| TraesCS3D01G382700.1 | Wheat | mitochondrion | 41.1 | 41.1 |
| TraesCS3D01G382800.1 | Wheat | mitochondrion | 41.1 | 40.61 |
| TraesCS3A01G390400.1 | Wheat | mitochondrion | 39.88 | 40.12 |
| TraesCS3A01G390500.1 | Wheat | mitochondrion | 40.49 | 40.0 |
| Os01t0907200-00 | Rice | mitochondrion | 44.79 | 37.24 |
| OQU80203 | Sorghum | mitochondrion | 33.74 | 35.95 |
| EES14399 | Sorghum | cytosol | 33.13 | 34.39 |
| HORVU2Hr1G083700.4 | Barley | plastid | 48.47 | 34.2 |
| AT3G51780.1 | Thale cress | cytosol | 28.83 | 17.47 |
| AT5G62100.1 | Thale cress | cytosol | 30.67 | 16.89 |
| AT5G07220.1 | Thale cress | cytosol | 27.61 | 14.85 |
| AT5G52060.1 | Thale cress | cytosol | 30.67 | 14.62 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:831287 | UniProt:A0A178U7B6 | ProteinID:AED92022.1 | ArrayExpress:AT5G14360 |
| EnsemblPlantsGene:AT5G14360 | RefSeq:AT5G14360 | TAIR:AT5G14360 | RefSeq:AT5G14360-TAIR-G | EnsemblPlants:AT5G14360.1 | TAIR:AT5G14360.1 |
| EMBL:BT012122 | EMBL:BT012376 | ProteinID:CAB87775.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | RefSeq:NP_196940.1 | ProteinID:OAO89530.1 | PFAM:PF00240 | PO:PO:0000293 | PFscan:PS50053 |
| PANTHER:PTHR10666 | PANTHER:PTHR10666:SF91 | UniProt:Q9LY93 | SUPFAM:SSF54236 | UniParc:UPI00000A8C9F | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_dom | SEG:seg | : | : | : | : |
Description
At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
Coordinates
chr5:+:4630892..4631851
Molecular Weight (calculated)
18473.4 Da
IEP (calculated)
9.617
GRAVY (calculated)
-0.519
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.