Factsheet for TraesCS2A01G321800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G321700.1	Wheat	mitochondrion	94.74	95.86
TraesCS2A01G322100.1	Wheat	mitochondrion	93.57	94.12
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	92.4	93.49
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	91.81	92.9
HORVU2Hr1G083660.1	Barley	plastid	89.47	90.0
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	89.47	87.93
EES11012	Sorghum	mitochondrion	74.27	80.38
EES11013	Sorghum	mitochondrion	74.27	78.4
Zm00001d003264_P001	Maize	mitochondrion	68.42	70.06
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	59.65	67.11
TraesCS6A01G211300.1	Wheat	mitochondrion	61.99	67.09
HORVU2Hr1G083700.4	Barley	plastid	89.47	66.23
GSMUA_AchrUn_...	Banana	cytosol	55.56	62.91
VIT_14s0219g00210.t01	Wine grape	cytosol	52.05	60.54
PGSC0003DMT400017936	Potato	mitochondrion	40.94	55.12
KRG93982	Soybean	cytosol, mitochondrion	50.29	54.09
PGSC0003DMT400032912	Potato	mitochondrion	49.12	53.85
TraesCS3A01G390600.1	Wheat	mitochondrion	50.88	53.7
Solyc02g093610.2.1	Tomato	mitochondrion	47.95	53.59
TraesCS3A01G390300.1	Wheat	mitochondrion	49.12	51.85
KRH07081	Soybean	cytosol, mitochondrion	46.78	50.96
TraesCS3A01G390500.1	Wheat	mitochondrion	49.12	50.91
TraesCS3A01G390400.1	Wheat	mitochondrion	47.95	50.62
KRG94376	Soybean	cytosol, mitochondrion	45.61	50.0
CDX85601	Canola	cytosol, mitochondrion	43.86	46.88
AT5G14360.1	Thale cress	cytosol, mitochondrion	44.44	46.63
CDX91068	Canola	cytosol, mitochondrion	43.86	46.58
Bra023460.1-P	Field mustard	cytosol, mitochondrion	43.27	46.25
CDX70560	Canola	cytosol, mitochondrion	43.86	46.01
Bra006251.1-P	Field mustard	cytosol, mitochondrion	43.86	46.01
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	42.11	44.44
CDY70267	Canola	cytosol, mitochondrion, plastid	42.11	44.44
CDY36367	Canola	plastid	42.11	44.44
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	41.52	43.03
CDX78574	Canola	cytosol, mitochondrion	40.94	42.17
CDY09848	Canola	cytosol	28.66	36.84
TraesCS3A01G350700.1	Wheat	cytosol	31.58	20.15
TraesCS2A01G463500.1	Wheat	cytosol	31.58	20.07
TraesCS7A01G269600.2	Wheat	cytosol	31.58	16.72
TraesCS7A01G055400.1	Wheat	mitochondrion	31.58	15.65
TraesCS4A01G442100.1	Wheat	mitochondrion	31.58	15.38
TraesCS5A01G312500.1	Wheat	cytosol	29.82	15.0

Protein Annotations

EnsemblPlants:TraesCS2A01G321800.1	EnsemblPlantsGene:TraesCS2A01G321800	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF178	PFAM:PF00240
PFscan:PS50053	SEG:seg	SUPFAM:SSF54236	TIGR:cd01812	MapMan:35.1	:

Description

No Description!

Coordinates

chr2A:-:551446641..551451571

Molecular Weight (calculated)

18781.6 Da

IEP (calculated)

10.466

GRAVY (calculated)

-0.466

Length

171 amino acids

Sequence
(BLAST)

001: MKLRCPNPKR LFRRSSSKIS RSSSSCSSRS SSDNGSDASG GIRGGGGSGE IEWEVRPGGM LVQRRDGRGD VEIITVRVAT GYSWHEVSIG ATCTFGELKV
101: VVSMVTGLEP REQRLLFRGK EKEHSDHLHM VGVRDKDKVL LLEDPALKDM KLRAALAGRA VQSPYHTFIK V

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.