CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11012	Sorghum	mitochondrion	79.01	81.01
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	80.86	77.51
HORVU2Hr1G083660.1	Barley	plastid	80.25	76.47
TraesCS2D01G341100.1	Wheat	mitochondrion	79.63	76.33
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	79.63	76.33
TraesCS2A01G321700.1	Wheat	mitochondrion	79.63	76.33
TraesCS2D01G340900.1	Wheat	mitochondrion	79.63	75.88
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	79.01	75.74
TraesCS2A01G322100.1	Wheat	mitochondrion	79.01	75.29
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	80.25	74.71
TraesCS2B01G360600.1	Wheat	mitochondrion	78.4	74.27
TraesCS2A01G321800.1	Wheat	mitochondrion	78.4	74.27
EES05371	Sorghum	mitochondrion	70.37	70.81
GSMUA_AchrUn_...	Banana	cytosol	61.73	66.23
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	61.73	65.79
VIT_14s0219g00210.t01	Wine grape	cytosol	55.56	61.22
PGSC0003DMT400017936	Potato	mitochondrion	45.68	58.27
HORVU2Hr1G083700.4	Barley	plastid	80.86	56.71
OQU88071	Sorghum	mitochondrion	56.17	56.52
Solyc02g093610.2.1	Tomato	mitochondrion	53.09	56.21
KRG93982	Soybean	cytosol, mitochondrion	54.32	55.35
PGSC0003DMT400032912	Potato	mitochondrion	52.47	54.49
KRH07081	Soybean	cytosol, mitochondrion	51.23	52.87
KRG94376	Soybean	cytosol, mitochondrion	50.62	52.56
CDX85601	Canola	cytosol, mitochondrion	46.91	47.5
CDX91068	Canola	cytosol, mitochondrion	46.91	47.2
Bra023460.1-P	Field mustard	cytosol, mitochondrion	46.3	46.88
AT5G14360.1	Thale cress	cytosol, mitochondrion	46.91	46.63
Bra006251.1-P	Field mustard	cytosol, mitochondrion	46.91	46.63
CDX70560	Canola	cytosol, mitochondrion	46.91	46.63
CDX78574	Canola	cytosol, mitochondrion	44.44	43.37
CDY36367	Canola	plastid	43.21	43.21
CDY70267	Canola	cytosol, mitochondrion, plastid	43.21	43.21
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	43.21	43.21
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	43.21	42.42
OQU80203	Sorghum	mitochondrion	37.65	39.87
EES14399	Sorghum	cytosol	37.04	38.22
CDY09848	Canola	cytosol	30.25	36.84
EES01703	Sorghum	cytosol	37.65	23.55
EES11441	Sorghum	cytosol	31.48	18.75
KXG36034	Sorghum	cytosol	35.19	17.17
EES14129	Sorghum	cytosol	33.33	16.41
EER87751	Sorghum	cytosol	33.95	15.85

Protein Annotations

EnsemblPlants:EES11013	EnsemblPlantsGene:SORBI_3006G125200	EntrezGene:8073677	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF178
PFAM:PF00240	PFscan:PS50053	ProteinID:EES11013	ProteinID:EES11013.1	RefSeq:XP_002446685.1	SEG:seg
SUPFAM:SSF54236	UniParc:UPI0001A86FC0	UniProt:C5YAV7	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr6:+:49056180..49058163

Molecular Weight (calculated)

17845.5 Da

IEP (calculated)

10.026

GRAVY (calculated)

-0.456

Length

162 amino acids

Sequence
(BLAST)

001: MIKLRCSKKL FRRSSSNSKG STAGSSSSSD GGDAGSGGRG EIEWEVRPGG MLVQKREGRP DVEVITVRVA TGFSWHDVSI GATCTFEELK AVLSMVTGLE
101: PREQRLLFRG KEREDGDHLH MVGVRDRDKV LLLEDPALKD MKLRATLVAQ TAQSPYRPFI KV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.