CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07081	Soybean	cytosol, mitochondrion	76.73	77.71
KRG94376	Soybean	cytosol, mitochondrion	74.21	75.64
VIT_14s0219g00210.t01	Wine grape	cytosol	67.92	73.47
PGSC0003DMT400017936	Potato	mitochondrion	55.97	70.08
Solyc02g093610.2.1	Tomato	mitochondrion	57.86	60.13
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	56.6	59.21
PGSC0003DMT400032912	Potato	mitochondrion	57.86	58.97
Zm00001d050988_P001	Maize	mitochondrion	54.09	58.9
Bra023460.1-P	Field mustard	cytosol, mitochondrion	57.23	56.88
CDX91068	Canola	cytosol, mitochondrion	57.23	56.52
CDX85601	Canola	cytosol, mitochondrion	56.6	56.25
EES11012	Sorghum	mitochondrion	55.35	55.7
Os02t0597700-00	Rice	mitochondrion	58.49	55.36
EES05371	Sorghum	mitochondrion	55.97	55.28
Bra006251.1-P	Field mustard	cytosol, mitochondrion	56.6	55.21
AT5G14360.1	Thale cress	cytosol, mitochondrion	56.6	55.21
CDX70560	Canola	cytosol, mitochondrion	56.6	55.21
GSMUA_AchrUn_...	Banana	cytosol	52.2	54.97
EES11013	Sorghum	mitochondrion	55.35	54.32
TraesCS6D01G194400.1	Wheat	mitochondrion	54.72	54.04
TraesCS6B01G240800.1	Wheat	mitochondrion	55.35	53.66
HORVU6Hr1G053980.1	Barley	mitochondrion	53.46	53.12
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	55.97	52.66
TraesCS6A01G211300.1	Wheat	mitochondrion	52.2	52.53
Zm00001d017107_P001	Maize	mitochondrion	54.09	52.12
TraesCS2D01G341100.1	Wheat	mitochondrion	55.35	52.07
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	55.35	52.07
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	55.35	52.07
TraesCS2A01G322100.1	Wheat	mitochondrion	54.72	51.18
CDX78574	Canola	cytosol, mitochondrion	52.83	50.6
TraesCS2D01G340900.1	Wheat	mitochondrion	54.09	50.59
TraesCS2A01G321700.1	Wheat	mitochondrion	53.46	50.3
TraesCS2A01G321800.1	Wheat	mitochondrion	54.09	50.29
HORVU2Hr1G083660.1	Barley	plastid	53.46	50.0
Zm00001d003264_P001	Maize	mitochondrion	52.2	49.7
OQU88071	Sorghum	mitochondrion	50.31	49.69
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	54.09	49.43
TraesCS2B01G360600.1	Wheat	mitochondrion	52.83	49.12
Zm00001d042449_P001	Maize	mitochondrion	49.06	47.56
TraesCS3A01G390600.1	Wheat	mitochondrion	46.54	45.68
Zm00001d012109_P001	Maize	mitochondrion	47.17	45.18
TraesCS3B01G422300.1	Wheat	mitochondrion	45.91	45.06
TraesCS3B01G422400.1	Wheat	mitochondrion	45.91	45.06
CDY09848	Canola	cytosol	37.11	44.36
TraesCS3D01G382800.1	Wheat	mitochondrion	45.91	44.24
TraesCS3D01G383200.1	Wheat	mitochondrion	45.28	44.17
HORVU3Hr1G081400.3	Barley	mitochondrion	45.28	43.9
TraesCS3D01G382600.1	Wheat	mitochondrion	44.65	43.83
TraesCS3A01G390300.1	Wheat	mitochondrion	44.65	43.83
TraesCS3D01G383000.1	Wheat	mitochondrion	45.28	43.64
TraesCS3D01G382700.1	Wheat	mitochondrion	44.65	43.56
TraesCS3A01G390400.1	Wheat	mitochondrion	43.4	42.59
TraesCS3A01G390500.1	Wheat	mitochondrion	44.03	42.42
OQU80203	Sorghum	mitochondrion	38.99	40.52
Os01t0907200-00	Rice	mitochondrion	47.8	38.78
HORVU2Hr1G083700.4	Barley	plastid	54.72	37.66
EES14399	Sorghum	cytosol	36.48	36.94
KRH72721	Soybean	cytosol	44.65	26.49
KRH11143	Soybean	cytosol, plastid	33.33	21.12
KRH21104	Soybean	cytosol, plastid	31.45	19.76
KRH09137	Soybean	cytosol	37.11	19.22
KRH75994	Soybean	cytosol	30.19	18.97
KRH49429	Soybean	cytosol	29.56	18.5
KRH65641	Soybean	nucleus	28.93	18.4
KRH38607	Soybean	cytosol	36.48	17.06
KRH09139	Soybean	cytosol, plastid	36.48	16.38
KRH57254	Soybean	cytosol	27.67	16.0
KRH38609	Soybean	cytosol, plastid	34.59	15.58
KRH03982	Soybean	cytosol	26.42	15.33
KRH44514	Soybean	cytosol, plastid	17.61	15.05
KRH35375	Soybean	cytosol	16.35	9.63

Protein Annotations

EntrezGene:100815369	Gene3D:3.10.20.90	MapMan:35.1	EMBL:ACUP02011659	EMBL:BT099212	UniProt:C6TN95
EnsemblPlantsGene:GLYMA_19G054400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	EnsemblPlants:KRG93982
ProteinID:KRG93982	ProteinID:KRG93982.1	PFAM:PF00240	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF91
SUPFAM:SSF54236	UniParc:UPI0001B17364	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:-:9007059..9008780

Molecular Weight (calculated)

17734.5 Da

IEP (calculated)

10.041

GRAVY (calculated)

-0.518

Length

159 amino acids

Sequence
(BLAST)

001: MIRLRSKRFS RSSSKPGNNG SKAASSSPEK DCKSIGEIKW ELRPGGMLVQ KRESNQSSGE GVITIRVSTV SQWHDINIDA TSTFGELKMI LSLVTSLEPR
101: EQRLLFRGKE KEDNEFLHMV GVRDKDKVLL LEDPAIKEMK LLGMARGQPI NNTCCTISA

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.