Factsheet for TraesCS3B01G422400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G383200.1	Wheat	mitochondrion	95.68	95.09
TraesCS3A01G390600.1	Wheat	mitochondrion	94.44	94.44
TraesCS3D01G382800.1	Wheat	mitochondrion	95.68	93.94
TraesCS3D01G383000.1	Wheat	mitochondrion	95.06	93.33
TraesCS3A01G390500.1	Wheat	mitochondrion	95.06	93.33
TraesCS3A01G390400.1	Wheat	mitochondrion	92.59	92.59
TraesCS3B01G422300.1	Wheat	mitochondrion	91.36	91.36
HORVU3Hr1G081400.3	Barley	mitochondrion	90.12	89.02
Zm00001d042449_P001	Maize	mitochondrion	86.42	85.37
OQU88071	Sorghum	mitochondrion	83.95	84.47
Zm00001d012109_P001	Maize	mitochondrion	81.48	79.52
Os01t0907200-00	Rice	mitochondrion	81.48	67.35
GSMUA_AchrUn_...	Banana	cytosol	51.23	54.97
TraesCS6B01G240800.1	Wheat	mitochondrion	54.94	54.27
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	48.77	51.97
TraesCS2B01G360600.1	Wheat	mitochondrion	54.32	51.46
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	53.09	50.89
VIT_14s0219g00210.t01	Wine grape	cytosol	45.06	49.66
PGSC0003DMT400017936	Potato	mitochondrion	37.04	47.24
KRH07081	Soybean	cytosol, mitochondrion	45.06	46.5
KRG94376	Soybean	cytosol, mitochondrion	44.44	46.15
KRG93982	Soybean	cytosol, mitochondrion	45.06	45.91
OQU80203	Sorghum	mitochondrion	43.21	45.75
Solyc02g093610.2.1	Tomato	mitochondrion	41.98	44.44
CDX85601	Canola	cytosol, mitochondrion	43.83	44.38
PGSC0003DMT400032912	Potato	mitochondrion	42.59	44.23
CDX91068	Canola	cytosol, mitochondrion	43.83	44.1
Bra023460.1-P	Field mustard	cytosol, mitochondrion	43.21	43.75
Bra006251.1-P	Field mustard	cytosol, mitochondrion	43.83	43.56
CDX70560	Canola	cytosol, mitochondrion	43.83	43.56
AT5G14360.1	Thale cress	cytosol, mitochondrion	42.59	42.33
CDX78574	Canola	cytosol, mitochondrion	40.74	39.76
EES14399	Sorghum	cytosol	38.27	39.49
CDY36367	Canola	plastid	37.04	37.04
CDY70267	Canola	cytosol, mitochondrion, plastid	37.04	37.04
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	37.04	37.04
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	37.65	36.97
CDY09848	Canola	cytosol	29.01	35.34
TraesCS2B01G485500.1	Wheat	cytosol	35.19	21.11
TraesCS3B01G383300.1	Wheat	cytosol	32.1	19.4
TraesCS7B01G167800.1	Wheat	cytosol	30.86	15.48
TraesCS5B01G313500.1	Wheat	cytosol	27.16	12.43

Protein Annotations

EnsemblPlants:TraesCS3B01G422400.1	EnsemblPlantsGene:TraesCS3B01G422400	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF115	PFAM:PF00240
PFscan:PS50053	SEG:seg	SUPFAM:SSF54236	TIGR:cd01812	MapMan:35.1	:

Description

No Description!

Coordinates

chr3B:-:659297571..659305367

Molecular Weight (calculated)

18017.8 Da

IEP (calculated)

7.565

GRAVY (calculated)

-0.298

Length

162 amino acids

Sequence
(BLAST)

001: MVKIPSPRRL FRSRSRSTLG GGGGVDMCAM VAEHERIEWE VRPGGMLVQK RRAPDDDDVV EAILVRVSAG CGGWQHDVSI DATATFGDLK VLLSLATGLW
101: PREQRLLYRG RERDDGDHLH MAGVQDKDKV LLLEDPAMTE RKLRSTTLAQ LMGVPCHSFI QV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.