CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07081	Soybean	cytosol, mitochondrion	92.95	92.36
KRG93982	Soybean	cytosol, mitochondrion	75.64	74.21
VIT_14s0219g00210.t01	Wine grape	cytosol	68.59	72.79
PGSC0003DMT400017936	Potato	mitochondrion	51.28	62.99
CDX91068	Canola	cytosol, mitochondrion	59.62	57.76
CDX85601	Canola	cytosol, mitochondrion	58.97	57.5
Bra023460.1-P	Field mustard	cytosol, mitochondrion	58.33	56.88
Solyc02g093610.2.1	Tomato	mitochondrion	55.13	56.21
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	54.49	55.92
Bra006251.1-P	Field mustard	cytosol, mitochondrion	58.33	55.83
CDX70560	Canola	cytosol, mitochondrion	58.33	55.83
Zm00001d050988_P001	Maize	mitochondrion	51.92	55.48
PGSC0003DMT400032912	Potato	mitochondrion	55.13	55.13
GSMUA_AchrUn_...	Banana	cytosol	52.56	54.3
AT5G14360.1	Thale cress	cytosol, mitochondrion	56.41	53.99
EES05371	Sorghum	mitochondrion	54.49	52.8
TraesCS6D01G194400.1	Wheat	mitochondrion	53.85	52.17
HORVU6Hr1G053980.1	Barley	mitochondrion	53.21	51.88
TraesCS6B01G240800.1	Wheat	mitochondrion	54.49	51.83
CDX78574	Canola	cytosol, mitochondrion	54.49	51.2
EES11012	Sorghum	mitochondrion	51.28	50.63
EES11013	Sorghum	mitochondrion	52.56	50.62
Os02t0597700-00	Rice	mitochondrion	54.49	50.6
TraesCS6A01G211300.1	Wheat	mitochondrion	50.64	50.0
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	53.21	49.11
TraesCS2D01G341100.1	Wheat	mitochondrion	52.56	48.52
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	52.56	48.52
Zm00001d017107_P001	Maize	mitochondrion	51.28	48.48
OQU88071	Sorghum	mitochondrion	50.0	48.45
TraesCS2D01G340900.1	Wheat	mitochondrion	52.56	48.24
HORVU2Hr1G083660.1	Barley	plastid	52.56	48.24
TraesCS2A01G321700.1	Wheat	mitochondrion	51.92	47.93
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	51.28	47.34
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	52.56	47.13
TraesCS2A01G322100.1	Wheat	mitochondrion	51.28	47.06
TraesCS2B01G360600.1	Wheat	mitochondrion	51.28	46.78
Zm00001d042449_P001	Maize	mitochondrion	48.72	46.34
CDY09848	Canola	cytosol	39.1	45.86
TraesCS2A01G321800.1	Wheat	mitochondrion	50.0	45.61
TraesCS3A01G390600.1	Wheat	mitochondrion	46.79	45.06
Zm00001d003264_P001	Maize	mitochondrion	48.08	44.91
Zm00001d012109_P001	Maize	mitochondrion	47.44	44.58
TraesCS3B01G422300.1	Wheat	mitochondrion	46.15	44.44
TraesCS3B01G422400.1	Wheat	mitochondrion	46.15	44.44
TraesCS3D01G382600.1	Wheat	mitochondrion	45.51	43.83
TraesCS3A01G390300.1	Wheat	mitochondrion	45.51	43.83
TraesCS3D01G382800.1	Wheat	mitochondrion	46.15	43.64
TraesCS3D01G382700.1	Wheat	mitochondrion	45.51	43.56
TraesCS3D01G383200.1	Wheat	mitochondrion	45.51	43.56
HORVU3Hr1G081400.3	Barley	mitochondrion	45.51	43.29
TraesCS3D01G383000.1	Wheat	mitochondrion	45.51	43.03
TraesCS3A01G390500.1	Wheat	mitochondrion	45.51	43.03
TraesCS3A01G390400.1	Wheat	mitochondrion	44.23	42.59
OQU80203	Sorghum	mitochondrion	37.82	38.56
Os01t0907200-00	Rice	mitochondrion	47.44	37.76
HORVU2Hr1G083700.4	Barley	plastid	53.85	36.36
EES14399	Sorghum	cytosol	35.9	35.67
KRH72721	Soybean	cytosol	42.31	24.63
KRH11143	Soybean	cytosol, plastid	31.41	19.52
KRH09137	Soybean	cytosol	35.26	17.92
KRH21104	Soybean	cytosol, plastid	28.85	17.79
KRH49429	Soybean	cytosol	28.21	17.32
KRH57254	Soybean	cytosol	28.85	16.36
KRH75994	Soybean	cytosol	25.64	15.81
KRH03982	Soybean	cytosol	27.56	15.69
KRH09139	Soybean	cytosol, plastid	35.26	15.54
KRH38607	Soybean	cytosol	33.33	15.29
KRH44514	Soybean	cytosol, plastid	17.95	15.05
KRH65641	Soybean	nucleus	23.72	14.8
KRH38609	Soybean	cytosol, plastid	32.69	14.45
KRH35375	Soybean	cytosol	16.03	9.26

Protein Annotations

EMBL:ACUP02011943	EnsemblPlants:KRG94376	EnsemblPlantsGene:GLYMA_19G080300	EntrezGene:100803638	Gene3D:3.10.20.90	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF91	PFAM:PF00240	PFscan:PS50053	ProteinID:KRG94376	ProteinID:KRG94376.1	SUPFAM:SSF54236
UniParc:UPI00023D8176	UniProt:I1N7I2	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:28987071..28988733

Molecular Weight (calculated)

17613.5 Da

IEP (calculated)

10.133

GRAVY (calculated)

-0.499

Length

156 amino acids

Sequence
(BLAST)

001: MIKLRSMRFS RSSSKLGNGH KATPPIEKDC RSIGEIQWEL RPGGMLVQKR KSNQSAGEGM ITIIVSTMSQ SQEISIEATS TFGELKMILS LVTSFEPREQ
101: RLLFKGKERD DDEYLHMVGV REKDKVLLLE DPAIKEKKLL GLRDQPINNP SRAISV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.