Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G360700.1 | Wheat | cytosol, mitochondrion | 67.97 | 92.9 |
| HORVU2Hr1G083680.2 | Barley | cytosol, mitochondrion, plastid | 67.97 | 92.9 |
| HORVU2Hr1G083660.1 | Barley | plastid | 67.1 | 91.18 |
| TraesCS2A01G321900.1 | Wheat | cytosol, mitochondrion, plastid | 66.23 | 90.53 |
| TraesCS2A01G321800.1 | Wheat | mitochondrion | 66.23 | 89.47 |
| TraesCS2A01G322000.1 | Wheat | cytosol, mitochondrion, plastid | 66.67 | 88.51 |
| EES11012 | Sorghum | mitochondrion | 56.71 | 82.91 |
| EES11013 | Sorghum | mitochondrion | 56.71 | 80.86 |
| HORVU6Hr1G053980.1 | Barley | mitochondrion | 51.52 | 74.38 |
| Zm00001d003264_P001 | Maize | mitochondrion | 51.95 | 71.86 |
| GSMUA_Achr6P06780_001 | Banana | cytosol, mitochondrion | 45.89 | 69.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.86 | 65.56 |
| VIT_14s0219g00210.t01 | Wine grape | cytosol | 39.83 | 62.59 |
| PGSC0003DMT400017936 | Potato | mitochondrion | 31.17 | 56.69 |
| Solyc02g093610.2.1 | Tomato | mitochondrion | 37.23 | 56.21 |
| KRH07081 | Soybean | cytosol, mitochondrion | 37.23 | 54.78 |
| KRG93982 | Soybean | cytosol, mitochondrion | 37.66 | 54.72 |
| PGSC0003DMT400032912 | Potato | mitochondrion | 36.8 | 54.49 |
| HORVU3Hr1G081400.3 | Barley | mitochondrion | 38.53 | 54.27 |
| KRG94376 | Soybean | cytosol, mitochondrion | 36.36 | 53.85 |
| CDX85601 | Canola | cytosol, mitochondrion | 33.77 | 48.75 |
| AT5G14360.1 | Thale cress | cytosol, mitochondrion | 34.2 | 48.47 |
| CDX91068 | Canola | cytosol, mitochondrion | 33.77 | 48.45 |
| Bra023460.1-P | Field mustard | cytosol, mitochondrion | 33.33 | 48.12 |
| CDX70560 | Canola | cytosol, mitochondrion | 33.77 | 47.85 |
| Bra006251.1-P | Field mustard | cytosol, mitochondrion | 33.77 | 47.85 |
| CDY36367 | Canola | plastid | 32.03 | 45.68 |
| Bra025558.1-P | Field mustard | cytosol, mitochondrion, plastid | 32.03 | 45.68 |
| CDY70267 | Canola | cytosol, mitochondrion, plastid | 32.03 | 45.68 |
| CDX78574 | Canola | cytosol, mitochondrion | 31.6 | 43.98 |
| AT5G40630.1 | Thale cress | cytosol, mitochondrion, plastid | 31.17 | 43.64 |
| CDY09848 | Canola | cytosol | 22.08 | 38.35 |
| HORVU3Hr1G087700.1 | Barley | cytosol | 24.24 | 21.62 |
| HORVU2Hr1G103670.2 | Barley | cytosol | 21.21 | 18.63 |
| HORVU7Hr1G056700.2 | Barley | cytosol | 24.24 | 17.34 |
| HORVU5Hr1G080500.1 | Barley | cytosol | 23.81 | 15.76 |
| HORVU7Hr1G010230.1 | Barley | mitochondrion | 24.24 | 15.69 |
| HORVU2Hr1G103610.3 | Barley | cytosol, mitochondrion | 12.55 | 14.5 |
| HORVU5Hr1G080560.1 | Barley | peroxisome | 16.02 | 13.26 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G083700.4 | EnsemblPlantsGene:HORVU2Hr1G083700 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF178 | PFAM:PF00240 |
| PFscan:PS50053 | SEG:seg | SUPFAM:SSF54236 | UniParc:UPI000B47F4F1 | UniProt:A0A287IPD2 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:-:606892714..606894853
Molecular Weight (calculated)
24966.8 Da
IEP (calculated)
9.969
GRAVY (calculated)
-0.340
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: AARFQSLSCS IACHHLNLPP NSLLASYPIY THQGPVATTT TSSTASTTPT ARNDSRVIRA TMIKLRCPNP KRLFRRSSSK ISSSGSSTSR SSDDGSDASG
101: GIRGGGGSGE IEWEVRPGGM LVQRRDGRGD VEVITVRVAT GYSWHEVSIG ATCTFGELKV VVSMVTGLEP REQRLLFKGK EREDGDHLHM VGVRDKDKVL
201: LLEDPALKDI KLRAALAAQA LQSPYQTFIK V
101: GIRGGGGSGE IEWEVRPGGM LVQRRDGRGD VEVITVRVAT GYSWHEVSIG ATCTFGELKV VVSMVTGLEP REQRLLFKGK EREDGDHLHM VGVRDKDKVL
201: LLEDPALKDI KLRAALAAQA LQSPYQTFIK V
001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
Arabidopsis Description
At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.