CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85601	Canola	cytosol, mitochondrion	84.21	70.0
Bra023460.1-P	Field mustard	cytosol, mitochondrion	83.46	69.38
CDX91068	Canola	cytosol, mitochondrion	82.71	68.32
CDX70560	Canola	cytosol, mitochondrion	79.7	65.03
AT5G14360.1	Thale cress	cytosol, mitochondrion	78.2	63.8
CDX78574	Canola	cytosol, mitochondrion	76.69	61.45
VIT_14s0219g00210.t01	Wine grape	cytosol	46.62	42.18
KRG94376	Soybean	cytosol, mitochondrion	45.86	39.1
PGSC0003DMT400017936	Potato	mitochondrion	36.84	38.58
KRH07081	Soybean	cytosol, mitochondrion	45.11	38.22
KRG93982	Soybean	cytosol, mitochondrion	44.36	37.11
EES05371	Sorghum	mitochondrion	41.35	34.16
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	38.35	33.55
Os02t0597700-00	Rice	mitochondrion	42.11	33.33
GSMUA_AchrUn_...	Banana	cytosol	37.59	33.11
TraesCS6D01G194400.1	Wheat	mitochondrion	39.85	32.92
Zm00001d050988_P001	Maize	mitochondrion	36.09	32.88
HORVU6Hr1G053980.1	Barley	mitochondrion	39.1	32.5
TraesCS6B01G240800.1	Wheat	mitochondrion	39.85	32.32
Zm00001d017107_P001	Maize	mitochondrion	39.85	32.12
Solyc02g093610.2.1	Tomato	mitochondrion	36.84	32.03
TraesCS6A01G211300.1	Wheat	mitochondrion	36.84	31.01
CDY70267	Canola	cytosol, mitochondrion, plastid	37.59	30.86
CDY36367	Canola	plastid	37.59	30.86
EES11012	Sorghum	mitochondrion	36.09	30.38
EES11013	Sorghum	mitochondrion	36.84	30.25
PGSC0003DMT400032912	Potato	mitochondrion	35.34	30.13
HORVU2Hr1G083660.1	Barley	plastid	38.35	30.0
TraesCS2D01G341100.1	Wheat	mitochondrion	37.59	29.59
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	37.59	29.59
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	37.59	29.59
TraesCS2D01G340900.1	Wheat	mitochondrion	37.59	29.41
Zm00001d042449_P001	Maize	mitochondrion	36.09	29.27
HORVU3Hr1G081400.3	Barley	mitochondrion	36.09	29.27
OQU88071	Sorghum	mitochondrion	35.34	29.19
TraesCS3B01G422400.1	Wheat	mitochondrion	35.34	29.01
TraesCS3A01G390600.1	Wheat	mitochondrion	35.34	29.01
TraesCS2A01G321700.1	Wheat	mitochondrion	36.84	28.99
Zm00001d003264_P001	Maize	mitochondrion	36.09	28.74
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	37.59	28.74
TraesCS2A01G321800.1	Wheat	mitochondrion	36.84	28.66
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	36.09	28.4
TraesCS2A01G322100.1	Wheat	mitochondrion	36.09	28.24
OQU80203	Sorghum	mitochondrion	32.33	28.1
TraesCS2B01G360600.1	Wheat	mitochondrion	36.09	28.07
TraesCS3D01G382800.1	Wheat	mitochondrion	34.59	27.88
TraesCS3D01G383000.1	Wheat	mitochondrion	34.59	27.88
TraesCS3A01G390300.1	Wheat	mitochondrion	33.83	27.78
TraesCS3A01G390400.1	Wheat	mitochondrion	33.83	27.78
TraesCS3B01G422300.1	Wheat	mitochondrion	33.83	27.78
TraesCS3D01G382600.1	Wheat	mitochondrion	33.83	27.78
TraesCS3D01G383200.1	Wheat	mitochondrion	33.83	27.61
TraesCS3D01G382700.1	Wheat	mitochondrion	33.83	27.61
Zm00001d012109_P001	Maize	mitochondrion	33.83	27.11
TraesCS3A01G390500.1	Wheat	mitochondrion	33.08	26.67
EES14399	Sorghum	cytosol	29.32	24.84
Os01t0907200-00	Rice	mitochondrion	33.83	22.96
HORVU2Hr1G083700.4	Barley	plastid	38.35	22.08
CDX90634	Canola	cytosol	19.55	11.82
CDY29046	Canola	cytosol	19.55	11.35
CDX78039	Canola	cytosol	21.8	11.11
CDX73692	Canola	cytosol	21.8	10.98
CDY38897	Canola	cytosol	24.06	9.76
CDY68101	Canola	cytosol	23.31	9.51
CDY67495	Canola	cytosol	23.31	9.48
CDX98996	Canola	cytosol	21.8	9.48
CDX70017	Canola	cytosol	21.8	9.45
CDY30692	Canola	cytosol	21.05	9.43
CDY30694	Canola	cytosol	21.05	9.43
CDY27085	Canola	cytosol	22.56	9.17

Protein Annotations

EnsemblPlants:CDY09848	EnsemblPlantsGene:GSBRNA2T00031589001	Gene3D:3.10.20.90	InterPro:Ubiquitin-like_domsf	PANTHER:PTHR10666	PANTHER:PTHR10666:SF91
ProteinID:CDY09848	ProteinID:CDY09848.1	SUPFAM:SSF54236	UniParc:UPI0004EDEE5C	UniProt:A0A078FCR9	MapMan:35.2

Description

BnaC09g43130DBnaC09g43130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCR9]

Coordinates

chrLK031999:+:541130..541815

Molecular Weight (calculated)

15102.1 Da

IEP (calculated)

6.534

GRAVY (calculated)

-0.471

Length

133 amino acids

Sequence
(BLAST)

001: MIKFKSKRFE IRFGFGKRTN NKGTQEDQQQ KGFGNNSNEQ ESDGEDLISI RVSTFAHFND LSIEATFGEL KMVLTLLTGL EPKQQRLLFN GEYPHMVGVT
101: EKKDMFLLEG PALTEKRLID LNNISTSCPT IIV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.