CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029142.1-P	Field mustard	cytosol	100.0	100.0
CDY68101	Canola	cytosol	98.17	98.77
CDY27085	Canola	cytosol	88.11	88.38
CDY67495	Canola	cytosol	87.5	87.77
AT5G52060.1	Thale cress	cytosol	88.41	84.8
VIT_16s0100g00470.t01	Wine grape	cytosol	58.23	55.69
Zm00001d035816_P001	Maize	cytosol, plastid	28.05	55.42
GSMUA_Achr3P12380_001	Banana	cytosol	44.82	53.85
GSMUA_Achr4P19700_001	Banana	cytosol	41.77	53.52
CDX70017	Canola	cytosol	49.39	52.77
CDX98996	Canola	cytosol	49.09	52.61
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	25.3	51.88
CDY30692	Canola	cytosol	45.73	50.51
CDY30694	Canola	cytosol	45.73	50.51
GSMUA_Achr1P07950_001	Banana	cytosol	44.21	48.82
GSMUA_Achr3P14600_001	Banana	cytosol	43.6	48.47
GSMUA_Achr1P18860_001	Banana	cytosol	40.55	46.83
Zm00001d018265_P001	Maize	cytosol	43.29	45.37
TraesCS7A01G269600.2	Wheat	cytosol	44.51	45.2
GSMUA_Achr7P05880_001	Banana	cytosol	44.82	44.95
TraesCS7D01G270100.1	Wheat	cytosol	43.9	44.58
Zm00001d031732_P001	Maize	cytosol	43.29	44.38
TraesCS7B01G167800.1	Wheat	cytosol	43.6	44.27
HORVU7Hr1G056700.2	Barley	cytosol	43.6	44.27
Os08t0546100-00	Rice	cytosol	42.38	43.99
KXG36034	Sorghum	cytosol	44.51	43.98
Os09t0524800-01	Rice	cytosol, mitochondrion	44.21	43.41
Zm00001d021221_P001	Maize	cytosol	44.21	43.41
Zm00001d052733_P001	Maize	cytosol	40.85	43.37
KRH35375	Soybean	cytosol	35.37	42.96
EES14129	Sorghum	cytosol	42.38	42.25
TraesCS5A01G312500.1	Wheat	cytosol	42.99	41.47
Zm00001d006173_P001	Maize	cytosol	43.9	41.26
TraesCS5D01G319300.2	Wheat	cytosol	43.6	40.74
Os06t0126500-01	Rice	cytosol	41.46	40.12
HORVU5Hr1G080500.1	Barley	cytosol	42.68	40.11
TraesCS5B01G313500.1	Wheat	cytosol	43.29	40.11
Zm00001d035999_P002	Maize	mitochondrion	38.41	39.87
Zm00001d045513_P001	Maize	cytosol, mitochondrion	38.72	39.44
EER87751	Sorghum	cytosol	41.16	38.9
HORVU5Hr1G080560.1	Barley	peroxisome	32.62	38.35
TraesCS7D01G050300.1	Wheat	cytosol	39.02	37.87
CDX78039	Canola	cytosol	29.57	37.16
CDX73692	Canola	cytosol	29.88	37.12
TraesCS7A01G055400.1	Wheat	mitochondrion	38.11	36.23
TraesCS4A01G442100.1	Wheat	mitochondrion	38.11	35.61
HORVU7Hr1G010230.1	Barley	mitochondrion	38.11	35.01
CDX90634	Canola	cytosol	22.56	33.64
CDX70560	Canola	cytosol, mitochondrion	15.55	31.29
CDX91068	Canola	cytosol, mitochondrion	15.24	31.06
CDY29046	Canola	cytosol	21.65	31.0
CDX85601	Canola	cytosol, mitochondrion	14.94	30.62
CDX78574	Canola	cytosol, mitochondrion	14.94	29.52
CDY36367	Canola	plastid	14.02	28.4
CDY70267	Canola	cytosol, mitochondrion, plastid	14.02	28.4
CDY09848	Canola	cytosol	9.76	24.06

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	GO:A0A078HLX4	UniProt:A0A078HLX4	InterPro:BAG_dom_sf
InterPro:BAG_domain	EnsemblPlants:CDY38897	ProteinID:CDY38897	ProteinID:CDY38897.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0051087	EnsemblPlantsGene:GSBRNA2T00066745001	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF11	SMART:SM00264
SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI00025400DA	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg

Description

BnaA03g12820DBnaA03g12820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLX4]

Coordinates

chrLK032434:-:239705..241726

Molecular Weight (calculated)

36653.2 Da

IEP (calculated)

10.086

GRAVY (calculated)

-0.696

Length

328 amino acids

Sequence
(BLAST)

001: MMRNKPTNLP ATNGGRVSGA GAGGGGRESG GHDWEMRPGG MLVQKRNPDS DPVGAKPPPM IRVRVKYGSV YHEISISPHA SFGELKKMLS GPTGIHHQDQ
101: KLMYKDKERD SKAFLDVSGV KDKSKMVLIE DPISQEKRFL EMRKIAKTEK ASKAISDISL EVDRLGGRVS AFEMVIKKGG KVAEKDLVTV IELLMNELIK
201: LDGIVAEGDV KLQRKLQVKR VQNYVEALDV LKVKNSMANG QQKQSSRQRL ATIQEHRQEQ KPIQSLMDMP INYKQKKQEI EEEPGAGPNL MDSSTKWETF
301: DHHTATTTPL SSANNHAIPP RFNWEFFD

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.