Factsheet for TraesCS5A01G312500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6D01G402500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07220.1	TraesCS6D01G402500.1	AT5G02500.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G319300.2	Wheat	cytosol	95.88	92.88
TraesCS5B01G313500.1	Wheat	cytosol	95.0	91.24
HORVU5Hr1G080500.1	Barley	cytosol	90.0	87.68
Zm00001d021221_P001	Maize	cytosol	75.29	76.65
KXG36034	Sorghum	cytosol	73.82	75.6
Os09t0524800-01	Rice	cytosol, mitochondrion	73.82	75.15
Zm00001d018265_P001	Maize	cytosol	67.35	73.16
Zm00001d035816_P001	Maize	cytosol, plastid	35.29	72.29
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	32.65	69.38
Zm00001d006173_P001	Maize	cytosol	69.41	67.62
TraesCS7A01G269600.2	Wheat	cytosol	62.35	65.63
HORVU5Hr1G080560.1	Barley	peroxisome	50.0	60.93
GSMUA_Achr3P12380_001	Banana	cytosol	47.94	59.71
GSMUA_Achr3P14600_001	Banana	cytosol	50.29	57.97
GSMUA_Achr1P07950_001	Banana	cytosol	50.0	57.24
GSMUA_Achr4P19700_001	Banana	cytosol	42.06	55.86
GSMUA_Achr1P18860_001	Banana	cytosol	44.41	53.17
GSMUA_Achr7P05880_001	Banana	cytosol	49.41	51.38
KRH09137	Soybean	cytosol	41.76	46.25
TraesCS7A01G055400.1	Wheat	mitochondrion	46.76	46.09
VIT_16s0100g00470.t01	Wine grape	cytosol	46.18	45.77
TraesCS4A01G442100.1	Wheat	mitochondrion	46.76	45.3
KRH38607	Soybean	cytosol	45.29	45.29
KRH09139	Soybean	cytosol, plastid	46.18	44.35
CDX70017	Canola	cytosol	40.0	44.3
Bra009283.1-P	Field mustard	cytosol, plastid	40.0	44.3
CDX98996	Canola	cytosol	39.71	44.12
KRH38609	Soybean	cytosol, plastid	45.59	43.91
AT5G07220.1	Thale cress	cytosol	38.53	43.23
PGSC0003DMT400065070	Potato	cytosol	42.06	43.07
Solyc06g035720.2.1	Tomato	cytosol	41.76	43.03
Bra029142.1-P	Field mustard	cytosol	41.47	42.99
CDY38897	Canola	cytosol	41.47	42.99
PGSC0003DMT400037124	Potato	cytosol	42.94	42.82
Solyc08g080320.2.1	Tomato	cytosol, plastid	34.71	42.75
CDY68101	Canola	cytosol	40.59	42.33
Solyc03g026220.2.1	Tomato	cytosol	42.35	42.23
CDY67495	Canola	cytosol	40.59	42.2
CDY27085	Canola	cytosol	40.29	41.9
AT5G62100.1	Thale cress	cytosol	36.47	41.89
CDY30694	Canola	cytosol	36.47	41.75
CDY30692	Canola	cytosol	36.47	41.75
PGSC0003DMT400058588	Potato	cytosol	34.71	41.7
Bra029288.1-P	Field mustard	cytosol	36.18	41.41
AT5G52060.1	Thale cress	cytosol	41.18	40.94
KRH57254	Soybean	cytosol	32.94	40.73
TraesCS2A01G463500.1	Wheat	cytosol	32.06	40.52
KRH03982	Soybean	cytosol	32.65	40.51
Bra022577.1-P	Field mustard	cytosol	40.88	39.71
TraesCS3A01G350700.1	Wheat	cytosol	28.82	36.57
KRH35375	Soybean	cytosol	26.47	33.33
KRH44514	Soybean	cytosol, plastid	17.65	32.26
TraesCS6A01G211300.1	Wheat	mitochondrion	14.12	30.38
TraesCS2A01G321700.1	Wheat	mitochondrion	15.0	30.18
TraesCS2A01G322100.1	Wheat	mitochondrion	15.0	30.0
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	15.29	29.89
TraesCS2A01G321800.1	Wheat	mitochondrion	15.0	29.82
TraesCS3A01G390300.1	Wheat	mitochondrion	14.12	29.63
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	14.71	29.59
TraesCS3A01G390500.1	Wheat	mitochondrion	13.53	27.88
TraesCS3A01G390600.1	Wheat	mitochondrion	13.24	27.78
TraesCS3A01G390400.1	Wheat	mitochondrion	13.24	27.78

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PANTHER:PTHR12329	PANTHER:PTHR12329:SF30	SUPFAM:SSF54236
SUPFAM:SSF63491	EnsemblPlantsGene:TraesCS5A01G312500	EnsemblPlants:TraesCS5A01G312500.1	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	TIGR:cd01812
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:524011050..524012412

Molecular Weight (calculated)

36713.0 Da

IEP (calculated)

10.410

GRAVY (calculated)

-0.514

Length

340 amino acids

Sequence
(BLAST)

001: MMRAKGKATF LDAMKETTSP VSPAAAAKEA LKEDEWEVRP GGMLVQKRDP GSDAPAGAPV PTIRLKVKFN AVSHEIYISS QASFGDVKKM MSEKTGLHHE
101: DQKVLYKGKE MDSKAFLDMS GVKDRSKLAL LEDPDAQAKR LIEQRRADKA HRASKSVSRI SLDVDKLATK VSALEAIVRK GGKVVEADVV ALTEALMTEL
201: VKLDAIAADG EVKAQRRLQE KRVQKYVETL DVIRAKNAAA PKANGTGNGQ AKGDRSLHLP PRPPPVSQRR QFKQQPAPAT GKAAAAPPTA SWETFDLLSS
301: MPSTSSATAT TTMAAATTTT KPASNNNSTS PIPRFDWELF

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.