CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY40362

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07220.1	CDY40362	AT5G02500.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009283.1-P	Field mustard	cytosol, plastid	99.35	99.35
CDX98996	Canola	cytosol	99.02	99.35
AT5G07220.1	Thale cress	cytosol	83.71	84.82
CDY30692	Canola	cytosol	60.59	62.63
CDY30694	Canola	cytosol	60.59	62.63
Zm00001d035816_P001	Maize	cytosol, plastid	29.97	55.42
GSMUA_Achr3P12380_001	Banana	cytosol	45.93	51.65
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	26.71	51.25
GSMUA_Achr4P19700_001	Banana	cytosol	41.69	50.0
VIT_16s0100g00470.t01	Wine grape	cytosol	55.37	49.56
CDY38897	Canola	cytosol	52.77	49.39
CDY68101	Canola	cytosol	52.44	49.39
CDY27085	Canola	cytosol	52.12	48.93
CDY67495	Canola	cytosol	51.79	48.62
GSMUA_Achr1P07950_001	Banana	cytosol	44.63	46.13
GSMUA_Achr3P14600_001	Banana	cytosol	44.3	46.1
KXG36034	Sorghum	cytosol	48.53	44.88
Zm00001d018265_P001	Maize	cytosol	45.6	44.73
GSMUA_Achr1P18860_001	Banana	cytosol	41.04	44.37
TraesCS7A01G269600.2	Wheat	cytosol	46.25	43.96
Zm00001d031732_P001	Maize	cytosol	45.6	43.75
Zm00001d021221_P001	Maize	cytosol	47.56	43.71
HORVU7Hr1G056700.2	Barley	cytosol	45.93	43.65
Os09t0524800-01	Rice	cytosol, mitochondrion	47.23	43.41
TraesCS7D01G270100.1	Wheat	cytosol	45.6	43.34
EES14129	Sorghum	cytosol	46.25	43.16
GSMUA_Achr7P05880_001	Banana	cytosol	45.93	43.12
Os08t0546100-00	Rice	cytosol	44.3	43.04
TraesCS7B01G167800.1	Wheat	cytosol	44.95	42.72
Zm00001d052733_P001	Maize	cytosol	43.0	42.72
Zm00001d006173_P001	Maize	cytosol	47.23	41.55
Zm00001d035999_P002	Maize	mitochondrion	41.37	40.19
TraesCS5A01G312500.1	Wheat	cytosol	44.3	40.0
HORVU5Hr1G080500.1	Barley	cytosol	45.28	39.83
TraesCS5D01G319300.2	Wheat	cytosol	45.28	39.6
HORVU5Hr1G080560.1	Barley	peroxisome	35.83	39.43
TraesCS5B01G313500.1	Wheat	cytosol	44.95	38.98
Os06t0126500-01	Rice	cytosol	43.0	38.94
KRH35375	Soybean	cytosol	33.88	38.52
Zm00001d045513_P001	Maize	cytosol, mitochondrion	40.39	38.51
EER87751	Sorghum	cytosol	42.35	37.46
CDX78039	Canola	cytosol	29.97	35.25
CDX73692	Canola	cytosol	29.97	34.85
TraesCS7D01G050300.1	Wheat	cytosol	37.46	34.02
TraesCS7A01G055400.1	Wheat	mitochondrion	37.13	33.04
HORVU7Hr1G010230.1	Barley	mitochondrion	37.78	32.49
TraesCS4A01G442100.1	Wheat	mitochondrion	37.13	32.48
CDX90634	Canola	cytosol	22.8	31.82
CDX70560	Canola	cytosol, mitochondrion	15.96	30.06
CDX91068	Canola	cytosol, mitochondrion	15.64	29.81
CDX85601	Canola	cytosol, mitochondrion	15.31	29.38
CDY29046	Canola	cytosol	21.5	28.82
CDX78574	Canola	cytosol, mitochondrion	14.98	27.71
CDY36367	Canola	plastid	13.36	25.31
CDY70267	Canola	cytosol, mitochondrion, plastid	13.03	24.69
CDY09848	Canola	cytosol	9.45	21.8

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	GO:A0A078C020	InterPro:BAG_dom_sf	InterPro:BAG_domain
EnsemblPlants:CDX70017	ProteinID:CDX70017	ProteinID:CDX70017.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051087	EnsemblPlantsGene:GSBRNA2T00136113001	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	PFAM:PF02179
PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF31	SMART:SM00264	SUPFAM:SSF54236
SUPFAM:SSF63491	UniParc:UPI0004EEBFF8	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:

Description

BnaA10g23660D

Coordinates

chrLK031790:-:2724989..2726525

Molecular Weight (calculated)

34704.8 Da

IEP (calculated)

9.853

GRAVY (calculated)

-0.607

Length

307 amino acids

Sequence
(BLAST)

001: MMKMNTGTTP SLSVGGGGVS GNEWESRPGG MVVQRRTDQT SDAPRVIRVR VKYLSVYHEI NINSQSSFGE LKKVLSGQTG LHHEDMKILY KDKERDSKMF
101: LDLCGVKDRS KLVLKEDPMA QEKRLLEKRR NAVVEKAMKS IADISLEVDR LAGQVSAFET VINKGGKVEE KSLVNLIEML MNQLLRLDAI TADGDVKLKR
201: KMQVKRVQTY VETLDVLKVK NSTKKVDINK SVRHKPQTQT QYQQRDLLSF VDEEEVEEPR RDSGASSSGT PAVVTNDWEK MFDSTSAAKA VEPVKPVPPR
301: FKWEFFD

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.