CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27085	Canola	cytosol	96.33	96.33
Bra022577.1-P	Field mustard	cytosol	96.02	89.71
CDY38897	Canola	cytosol	87.77	87.5
CDY68101	Canola	cytosol	87.16	87.42
AT5G52060.1	Thale cress	cytosol	84.71	80.99
Zm00001d035816_P001	Maize	cytosol, plastid	26.91	53.01
VIT_16s0100g00470.t01	Wine grape	cytosol	55.35	52.77
GSMUA_Achr3P12380_001	Banana	cytosol	44.04	52.75
GSMUA_Achr4P19700_001	Banana	cytosol	41.28	52.73
CDX70017	Canola	cytosol	48.62	51.79
CDX98996	Canola	cytosol	48.32	51.63
CDY30694	Canola	cytosol	46.18	50.84
CDY30692	Canola	cytosol	46.18	50.84
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	24.16	49.38
GSMUA_Achr3P14600_001	Banana	cytosol	43.12	47.8
GSMUA_Achr1P07950_001	Banana	cytosol	43.12	47.47
GSMUA_Achr1P18860_001	Banana	cytosol	40.37	46.48
Zm00001d018265_P001	Maize	cytosol	42.81	44.73
Zm00001d031732_P001	Maize	cytosol	43.43	44.38
GSMUA_Achr7P05880_001	Banana	cytosol	44.34	44.34
TraesCS7A01G269600.2	Wheat	cytosol	43.73	44.27
TraesCS7B01G167800.1	Wheat	cytosol	43.73	44.27
TraesCS7D01G270100.1	Wheat	cytosol	43.73	44.27
Os08t0546100-00	Rice	cytosol	42.51	43.99
HORVU7Hr1G056700.2	Barley	cytosol	43.43	43.96
Zm00001d052733_P001	Maize	cytosol	41.28	43.69
KXG36034	Sorghum	cytosol	44.04	43.37
Zm00001d021221_P001	Maize	cytosol	44.04	43.11
Os09t0524800-01	Rice	cytosol, mitochondrion	44.04	43.11
EES14129	Sorghum	cytosol	41.9	41.64
Zm00001d006173_P001	Maize	cytosol	43.73	40.97
TraesCS5A01G312500.1	Wheat	cytosol	42.2	40.59
KRH35375	Soybean	cytosol	33.33	40.37
TraesCS5D01G319300.2	Wheat	cytosol	42.81	39.89
HORVU5Hr1G080500.1	Barley	cytosol	42.51	39.83
TraesCS5B01G313500.1	Wheat	cytosol	42.2	38.98
Os06t0126500-01	Rice	cytosol	40.06	38.64
Zm00001d035999_P002	Maize	mitochondrion	37.31	38.61
HORVU5Hr1G080560.1	Barley	peroxisome	32.11	37.63
Zm00001d045513_P001	Maize	cytosol, mitochondrion	37.0	37.58
EER87751	Sorghum	cytosol	39.45	37.18
CDX78039	Canola	cytosol	29.66	37.16
TraesCS7D01G050300.1	Wheat	cytosol	37.92	36.69
CDX73692	Canola	cytosol	29.36	36.36
TraesCS7A01G055400.1	Wheat	mitochondrion	37.31	35.36
TraesCS4A01G442100.1	Wheat	mitochondrion	37.31	34.76
HORVU7Hr1G010230.1	Barley	mitochondrion	37.61	34.45
CDX90634	Canola	cytosol	22.32	33.18
CDX70560	Canola	cytosol, mitochondrion	15.29	30.67
CDX91068	Canola	cytosol, mitochondrion	14.98	30.43
CDY29046	Canola	cytosol	21.1	30.13
CDX85601	Canola	cytosol, mitochondrion	14.68	30.0
CDX78574	Canola	cytosol, mitochondrion	14.68	28.92
CDY36367	Canola	plastid	14.07	28.4
CDY70267	Canola	cytosol, mitochondrion, plastid	14.07	28.4
CDY09848	Canola	cytosol	9.48	23.31

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	GO:A0A078JM31	UniProt:A0A078JM31	InterPro:BAG_dom_sf
InterPro:BAG_domain	EnsemblPlants:CDY67495	ProteinID:CDY67495	ProteinID:CDY67495.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0051087	EnsemblPlantsGene:GSBRNA2T00063677001	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF11	SMART:SM00264
SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI0004EDFD50	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg

Description

BnaC02g45010DBnaC02g45010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JM31]

Coordinates

chrLK036174:+:6396..8524

Molecular Weight (calculated)

36677.3 Da

IEP (calculated)

9.988

GRAVY (calculated)

-0.723

Length

327 amino acids

Sequence
(BLAST)

001: MMKVMRNKPT NLPATNGGRE SGGHDWEMRP GGMLVQKRNP DSDPVGAPPP PMIRVKIKYG SVYHEMSISP QASFGELKKM LSGPTGIHHQ DQKLMYKEKE
101: RDSKAFLDVS GVKDKSKMVL IEDPIGQEKR FLEMKKIGKT EKASKAVSDI SLEVDRLGGR VSAFEMVIKK GGKVAEKDLV TVIELLMNEL VKLDGIVAEG
201: DVKLQRKMQA TRVQNYVEAL DALKVKNSMA DGQQKQPKGR RLATIQEDSN GQRQEQKPIQ SLMDMPINYK HKKQEIVEEP RNSGPGPNLM DSSTKWETFD
301: HHAATSLSSI TANNHAIPPR FNWEFFD

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.