Factsheet for TraesCS7D01G050300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6D01G402500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07220.1	TraesCS6D01G402500.1	AT5G02500.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G442100.1	Wheat	mitochondrion	92.6	89.17
HORVU7Hr1G010230.1	Barley	mitochondrion	89.64	84.87
Zm00001d035999_P002	Maize	mitochondrion	64.2	68.67
Os06t0126500-01	Rice	cytosol	65.68	65.49
EER87751	Sorghum	cytosol	67.16	65.42
Zm00001d045513_P001	Maize	cytosol, mitochondrion	61.24	64.29
GSMUA_Achr3P12380_001	Banana	cytosol	40.83	50.55
GSMUA_Achr3P14600_001	Banana	cytosol	43.49	49.83
GSMUA_Achr1P07950_001	Banana	cytosol	42.9	48.82
TraesCS7D01G270100.1	Wheat	cytosol	46.45	48.61
GSMUA_Achr1P18860_001	Banana	cytosol	39.65	47.18
GSMUA_Achr4P19700_001	Banana	cytosol	34.02	44.92
TraesCS5D01G319300.2	Wheat	cytosol	45.86	44.16
GSMUA_Achr7P05880_001	Banana	cytosol	42.6	44.04
VIT_16s0100g00470.t01	Wine grape	cytosol	39.65	39.07
Bra029142.1-P	Field mustard	cytosol	37.87	39.02
CDY38897	Canola	cytosol	37.87	39.02
CDY68101	Canola	cytosol	37.57	38.96
Solyc06g035720.2.1	Tomato	cytosol	37.87	38.79
PGSC0003DMT400065070	Potato	cytosol	37.87	38.55
Solyc03g026220.2.1	Tomato	cytosol	38.76	38.42
CDY67495	Canola	cytosol	36.69	37.92
KRH38607	Soybean	cytosol	37.87	37.65
CDX98996	Canola	cytosol	34.02	37.58
TraesCS2D01G464700.1	Wheat	cytosol	29.88	37.55
PGSC0003DMT400037124	Potato	cytosol	37.87	37.54
Bra009283.1-P	Field mustard	cytosol, plastid	34.02	37.46
CDX70017	Canola	cytosol	34.02	37.46
AT5G52060.1	Thale cress	cytosol	37.57	37.13
CDY27085	Canola	cytosol	35.8	37.0
KRH03982	Soybean	cytosol	29.59	36.5
KRH09137	Soybean	cytosol	33.14	36.48
AT5G07220.1	Thale cress	cytosol	32.54	36.3
KRH09139	Soybean	cytosol, plastid	37.87	36.16
KRH57254	Soybean	cytosol	29.29	36.0
KRH38609	Soybean	cytosol, plastid	37.57	35.98
TraesCS3D01G344700.1	Wheat	cytosol	28.11	35.45
Bra022577.1-P	Field mustard	cytosol	36.69	35.43
Solyc08g080320.2.1	Tomato	cytosol, plastid	28.7	35.14
CDY30694	Canola	cytosol	30.77	35.02
CDY30692	Canola	cytosol	30.77	35.02
Bra029288.1-P	Field mustard	cytosol	30.77	35.02
PGSC0003DMT400058588	Potato	cytosol	28.99	34.63
AT5G62100.1	Thale cress	cytosol	28.7	32.77
TraesCS2D01G340900.1	Wheat	mitochondrion	15.98	31.76
TraesCS6D01G194400.1	Wheat	mitochondrion	14.5	30.43
TraesCS2D01G341100.1	Wheat	mitochondrion	15.09	30.18
TraesCS3D01G382600.1	Wheat	mitochondrion	14.2	29.63
TraesCS3D01G382700.1	Wheat	mitochondrion	14.2	29.45
KRH35375	Soybean	cytosol	23.08	28.89
TraesCS3D01G383200.1	Wheat	mitochondrion	13.31	27.61
TraesCS3D01G383000.1	Wheat	mitochondrion	13.31	27.27
TraesCS3D01G382800.1	Wheat	mitochondrion	12.72	26.06
KRH44514	Soybean	cytosol, plastid	14.2	25.81

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF20
SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	EnsemblPlantsGene:TraesCS7D01G050300	EnsemblPlants:TraesCS7D01G050300.1	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:25818124..25819226

Molecular Weight (calculated)

36392.5 Da

IEP (calculated)

10.495

GRAVY (calculated)

-0.630

Length

338 amino acids

Sequence
(BLAST)

001: MRRKGAPPPA PPAVPVEEGK KAPAVAVGAG KVSAEEVWEV RPGGMLVQKR GPEEDEPAPE SVKPVPTIRV KARLAGKTHE IYVSAEATFG DLRRRVAERA
101: GAHPEDLRTL YKGKEQDPKA FLDMAGVRDR SKVAVVDDPE ARARRLLEEL RQGSLRKAAG AVAAVAAEVD KIAPKVSALE ASVRKGEKVA EKDVATVTEL
201: LMNELLKLDA VVAGGDVKAQ RRVQVKRVQK YVETLDAVMA KNAAIAPKPA SAKKQPQQAA PQPTPARQQQ QPQPQPQSQR QRQQQPPQPP AQTTRWEMFD
301: LLSSLPTTSS SSSTTTDSST ASSAGAPPPP TNRLDWML

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.