Factsheet for Solyc06g035720.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065070	Potato	cytosol	96.67	96.08
Solyc03g026220.2.1	Tomato	cytosol	70.91	68.62
VIT_16s0100g00470.t01	Wine grape	cytosol	60.0	57.73
KRH09137	Soybean	cytosol	53.64	57.65
GSMUA_Achr4P19700_001	Banana	cytosol	43.64	56.25
KRH09139	Soybean	cytosol, plastid	60.0	55.93
GSMUA_Achr3P12380_001	Banana	cytosol	46.06	55.68
Zm00001d035816_P001	Maize	cytosol, plastid	27.58	54.82
KRH38607	Soybean	cytosol	56.06	54.41
KRH38609	Soybean	cytosol, plastid	58.18	54.39
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	25.15	51.88
GSMUA_Achr1P07950_001	Banana	cytosol	46.67	51.85
GSMUA_Achr3P14600_001	Banana	cytosol	45.45	50.85
GSMUA_Achr1P18860_001	Banana	cytosol	43.33	50.35
Solyc08g080320.2.1	Tomato	cytosol, plastid	41.82	50.0
GSMUA_Achr7P05880_001	Banana	cytosol	46.67	47.09
KXG36034	Sorghum	cytosol	46.06	45.78
Zm00001d018265_P001	Maize	cytosol	43.33	45.69
Zm00001d021221_P001	Maize	cytosol	45.76	45.21
Os08t0546100-00	Rice	cytosol	43.03	44.94
Os09t0524800-01	Rice	cytosol, mitochondrion	45.15	44.61
HORVU7Hr1G056700.2	Barley	cytosol	43.64	44.58
TraesCS7A01G269600.2	Wheat	cytosol	43.64	44.58
Zm00001d052733_P001	Maize	cytosol	41.52	44.34
TraesCS7D01G270100.1	Wheat	cytosol	43.33	44.27
TraesCS7B01G167800.1	Wheat	cytosol	43.03	43.96
Zm00001d031732_P001	Maize	cytosol	42.42	43.75
EES14129	Sorghum	cytosol	42.42	42.55
Zm00001d006173_P001	Maize	cytosol	44.24	41.83
TraesCS5A01G312500.1	Wheat	cytosol	43.03	41.76
TraesCS5D01G319300.2	Wheat	cytosol	43.94	41.31
Os06t0126500-01	Rice	cytosol	41.82	40.71
HORVU5Hr1G080500.1	Barley	cytosol	43.03	40.69
TraesCS5B01G313500.1	Wheat	cytosol	43.64	40.68
Zm00001d035999_P002	Maize	mitochondrion	38.48	40.19
EER87751	Sorghum	cytosol	41.82	39.77
Zm00001d045513_P001	Maize	cytosol, mitochondrion	38.79	39.75
HORVU5Hr1G080560.1	Barley	peroxisome	32.73	38.71
TraesCS7D01G050300.1	Wheat	cytosol	38.79	37.87
TraesCS7A01G055400.1	Wheat	mitochondrion	38.48	36.81
TraesCS4A01G442100.1	Wheat	mitochondrion	37.58	35.33
HORVU7Hr1G010230.1	Barley	mitochondrion	38.18	35.29
Solyc02g093610.2.1	Tomato	mitochondrion	16.36	35.29
Solyc06g007240.2.1	Tomato	cytosol	28.18	33.45
Solyc10g085290.1.1	Tomato	cytosol	33.03	31.23

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103
InterPro:IPR036533	UniProt:K4C4U4	PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PFscan:PS51035
PANTHER:PTHR12329	PANTHER:PTHR12329:SF11	SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	EnsemblPlantsGene:Solyc06g035720.2
EnsemblPlants:Solyc06g035720.2.1	UniParc:UPI0002765D57	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:

Description

No Description!

Coordinates

chr6:-:24816413..24819781

Molecular Weight (calculated)

37244.4 Da

IEP (calculated)

10.085

GRAVY (calculated)

-0.758

Length

330 amino acids

Sequence
(BLAST)

001: MKTRTTGMPP IMNGGSVGSE NEWELRPSGM LVQKRNLDSE NRRPPPTIRV RVKYRSVNHE INISSQATFG ELKKMLSGPT GLHHEDQKLL YKDKERENKT
101: FLDIAGVKDK SKIVLIEDPI SQEKRYLEMR KNAKVEKAAK TISDISLEVD RLARQVSALE SVVSKGGKVV EKDVINLTEL LMNQLLQLDG IIAEGDIKLQ
201: RKNQVRKVQK CVETLDVLKI KNSMPTNNGN HTPKDQSPPA RPHQDYMYLN EQASSPVQQH QDRHSFRNSP VQSKQQHQSR HSTSGSVVIT TQWETFDSTP
301: APLLDHFSSP TTTSSTHAAV AQSRISWDLL

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.