Factsheet for Solyc06g007240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052944	Potato	cytosol	93.88	93.88
VIT_06s0004g06960.t01	Wine grape	cytosol	49.64	57.98
GSMUA_AchrUn_...	Banana	cytosol	46.4	54.2
KRH72721	Soybean	cytosol	51.8	53.73
Zm00001d042985_P001	Maize	cytosol, extracellular	47.48	50.97
EES01703	Sorghum	cytosol	47.12	50.58
Zm00001d012460_P001	Maize	cytosol	43.17	49.79
HORVU3Hr1G087700.1	Barley	cytosol	44.96	48.26
GSMUA_Achr4P16720_001	Banana	cytosol	36.69	47.66
TraesCS3B01G383300.1	Wheat	cytosol	44.96	46.64
TraesCS3A01G350700.1	Wheat	cytosol	44.6	46.27
TraesCS3D01G344700.1	Wheat	cytosol	44.6	46.27
Os01t0831200-01	Rice	cytosol	43.53	46.18
Solyc10g085290.1.1	Tomato	cytosol	44.24	35.24
Solyc02g093610.2.1	Tomato	mitochondrion	17.99	32.68
Solyc08g080320.2.1	Tomato	cytosol, plastid	32.37	32.61
Solyc06g035720.2.1	Tomato	cytosol	33.45	28.18
Solyc03g026220.2.1	Tomato	cytosol	34.53	28.15

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
UniProt:K4C3A7	PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329
PANTHER:PTHR12329:SF21	SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	EnsemblPlantsGene:Solyc06g007240.2	EnsemblPlants:Solyc06g007240.2.1
UniParc:UPI0002766104	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:1298332..1301740

Molecular Weight (calculated)

31529.7 Da

IEP (calculated)

6.685

GRAVY (calculated)

-0.482

Length

278 amino acids

Sequence
(BLAST)

001: MRKKSSTSSK SKNEVIKDEN YKYTEFEEEK KSCIIDWEVR PGGLLVQKRV GISAEENSVA GPMIKIKVSY DSCYHDVVVP AESTFGNLKK ILWDTTGLHP
101: NVQRLLFQGK EKDEKECLHI SGVKDMSKVI LMEDPASKEL KKIQDTSISS QAIARVRVEV DKLSHRVVSI EEAVQRGTKV EDKEFVVLTE LFMIQLLTLD
201: GIEAEGEART QRRKEVHRIQ SFVDMIDNFK ARNSSIVSNC IGTISMVNTK WEKFDSGIGS LNAPNQSPKV TQEWEVFD

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.