Factsheet for Zm00001d042985_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003300_P001
Zm00001d017072_P002
Zm00001d040272_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51780.1	Zm00001d003300_P001	AT4G24690.1	21798944
AT3G51780.1	Zm00001d017072_P002	AT4G24690.1	21798944
AT3G51780.1	Zm00001d040272_P001	AT4G24690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01703	Sorghum	cytosol	96.91	96.91
Zm00001d012460_P001	Maize	cytosol	86.87	93.36
Os01t0831200-01	Rice	cytosol	86.1	85.11
HORVU3Hr1G087700.1	Barley	cytosol	83.4	83.4
TraesCS3B01G383300.1	Wheat	cytosol	81.08	78.36
TraesCS3A01G350700.1	Wheat	cytosol	81.08	78.36
TraesCS3D01G344700.1	Wheat	cytosol	80.31	77.61
VIT_08s0058g00130.t01	Wine grape	cytosol	56.37	65.47
VIT_06s0004g06960.t01	Wine grape	cytosol	54.83	59.66
GSMUA_AchrUn_...	Banana	cytosol	54.05	58.82
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	26.64	57.02
KRH75994	Soybean	cytosol	54.05	55.34
KRH65641	Soybean	nucleus	53.28	55.2
CDX78039	Canola	cytosol	54.44	54.02
Bra006876.1-P	Field mustard	cytosol	54.44	53.41
CDX73692	Canola	cytosol	54.44	53.41
KRH72721	Soybean	cytosol	55.21	53.36
KRH49429	Soybean	cytosol	52.12	53.15
AT3G51780.1	Thale cress	cytosol	52.51	50.56
GSMUA_Achr4P16720_001	Banana	cytosol	40.93	49.53
Solyc06g007240.2.1	Tomato	cytosol	50.97	47.48
PGSC0003DMT400052944	Potato	cytosol	49.42	46.04
CDX90634	Canola	cytosol	39.0	45.91
Bra012837.1-P	Field mustard	cytosol	39.0	45.91
CDY29046	Canola	cytosol	37.84	42.79
Solyc10g085290.1.1	Tomato	cytosol	54.05	40.11
Zm00001d050988_P001	Maize	mitochondrion	22.39	39.73
Zm00001d017107_P001	Maize	mitochondrion	23.94	37.58
Zm00001d002277_P001	Maize	plastid	38.61	37.31
Zm00001d035816_P001	Maize	cytosol, plastid	23.55	36.75
Zm00001d012109_P001	Maize	mitochondrion	23.17	36.14
Zm00001d003264_P001	Maize	mitochondrion	23.17	35.93
Zm00001d042449_P001	Maize	mitochondrion	22.39	35.37
Zm00001d031732_P001	Maize	cytosol	40.93	33.12
Zm00001d052733_P001	Maize	cytosol	39.38	33.01
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	20.08	32.5
Zm00001d021221_P001	Maize	cytosol	41.31	32.04
Zm00001d035999_P002	Maize	mitochondrion	39.0	31.96
Zm00001d018265_P001	Maize	cytosol	38.61	31.95
PGSC0003DMT400028657	Potato	cytosol	53.67	31.59
Zm00001d045513_P001	Maize	cytosol, mitochondrion	39.0	31.37
Zm00001d006173_P001	Maize	cytosol	40.15	29.8

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100273657	MapMan:19.1.5.5	Gene3D:3.10.20.90	UniProt:B4FV61	InterPro:BAG_dom_sf
InterPro:BAG_domain	EMBL:BT040999	EMBL:BT041582	EMBL:BT085239	EMBL:BT088003	ncoils:Coil
EMBL:EU961923	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626
InterPro:IPR003103	InterPro:IPR036533	ProteinID:ONM36681.1	PFAM:PF00240	PFAM:PF02179	PFscan:PS50053
PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF21	SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491
UniParc:UPI00017B81D0	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	EnsemblPlantsGene:Zm00001d042985	EnsemblPlants:Zm00001d042985_P001	EnsemblPlants:Zm00001d042985_T001
SEG:seg	:	:	:	:	:

Description

BAG family molecular chaperone regulator 4

Coordinates

chr3:-:185842111..185845454

Molecular Weight (calculated)

28767.6 Da

IEP (calculated)

7.519

GRAVY (calculated)

-0.454

Length

259 amino acids

Sequence
(BLAST)

001: MMSGRSGGRD AEGEWEVRPG GMLVQRRDGE AAGPVIRIRV SHGANFREVV VPAQATFGEL KRILVQTTGL EPERQRLFFR GKEKSDREFL HTAGVKDGAK
101: LLLLEKPAPA NIEQKVEPVI MDESMMKACA AVARVRVEVD KLSAKVCDLE KNVLGGRKVE DKEFVVLTEL LMMQLLKLDG IEAEGEARAQ RKAEVRRVQS
201: LVETLDKLKA RNANPFSDHN KAVSVTTQWE TFENGMGSLS APPPRVSSTQ ANTDWEQFD

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.