Factsheet for Bra006876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010484.1-P
Bra013825.1-P
Bra019212.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51780.1	Bra010484.1-P	AT4G24690.1	21798944
AT3G51780.1	Bra013825.1-P	AT4G24690.1	21798944
AT3G51780.1	Bra019212.1-P	AT4G24690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78039	Canola	cytosol	96.97	98.08
AT3G51780.1	Thale cress	cytosol	81.44	79.93
Bra012837.1-P	Field mustard	cytosol	57.58	69.09
VIT_08s0058g00130.t01	Wine grape	cytosol	49.24	58.3
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	25.0	54.55
Zm00001d042985_P001	Maize	cytosol, extracellular	53.41	54.44
EES01703	Sorghum	cytosol	53.41	54.44
HORVU3Hr1G087700.1	Barley	cytosol	51.52	52.51
Zm00001d012460_P001	Maize	cytosol	47.35	51.87
Os01t0831200-01	Rice	cytosol	51.14	51.53
TraesCS3D01G344700.1	Wheat	cytosol	51.52	50.75
KRH65641	Soybean	nucleus	47.73	50.4
TraesCS3A01G350700.1	Wheat	cytosol	51.14	50.37
TraesCS3B01G383300.1	Wheat	cytosol	50.76	50.0
KRH49429	Soybean	cytosol	46.97	48.82
GSMUA_AchrUn_...	Banana	cytosol	42.8	47.48
KRH75994	Soybean	cytosol	45.08	47.04
GSMUA_Achr4P16720_001	Banana	cytosol	32.58	40.19
Solyc10g085290.1.1	Tomato	cytosol	47.35	35.82
Bra009283.1-P	Field mustard	cytosol, plastid	34.85	29.97
Bra029142.1-P	Field mustard	cytosol	36.36	29.27
Bra029288.1-P	Field mustard	cytosol	32.58	28.96
PGSC0003DMT400028657	Potato	cytosol	47.73	28.64
Bra023460.1-P	Field mustard	cytosol, mitochondrion	17.05	28.12
Bra006251.1-P	Field mustard	cytosol, mitochondrion	17.05	27.61
Bra022577.1-P	Field mustard	cytosol	36.36	27.43
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	14.77	24.07

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	EnsemblPlantsGene:Bra006876
EnsemblPlants:Bra006876.1	EnsemblPlants:Bra006876.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	UniProt:M4CRN5	PFAM:PF00240
PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF21	SMART:SM00264
SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI0002542D48	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg

Description

AT3G51780 (E=4e-105) ATBAG4 | ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4); protein binding

Coordinates

chrA09:-:25928578..25929871

Molecular Weight (calculated)

28664.8 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.446

Length

264 amino acids

Sequence
(BLAST)

001: MMNNSTDDSE WEVRPGGMLV QRRDDSPTSH DPQHPAVFVQ TISINVSHGS SHHDLHVSAN ATFGDVKKAL VQKTGLEAAD LKILFRGVEK DDAEQLQASG
101: VKDGSKVVLV EEPNKRVKQV EQPPVMTEEM AKSVAAVKAV SGEIDKLSDK VVALEVSVNG GTKVAVEEFD MTAELLMRQL LKLDGIEAEG EARVLRKAEV
201: RRVQKLQEAV DTLKGRCSNP FVDQSKAAAV STEWETFGNG VGSLNPPPPA SPSANVTQDW EKFD

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.