Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51780.1 | KRH03220 | AT4G24690.1 | 21798944 |
| AT3G51780.1 | KRH57136 | AT4G24690.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65641 | Soybean | nucleus | 89.33 | 90.4 |
| VIT_08s0058g00130.t01 | Wine grape | cytosol | 57.31 | 65.02 |
| VIT_04s0044g02000.t01 | Wine grape | cytosol, peroxisome, plastid | 28.06 | 58.68 |
| KRH49429 | Soybean | cytosol | 57.71 | 57.48 |
| Zm00001d012460_P001 | Maize | cytosol | 53.75 | 56.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.57 | 55.88 |
| EES01703 | Sorghum | cytosol | 56.52 | 55.21 |
| Zm00001d042985_P001 | Maize | cytosol, extracellular | 55.34 | 54.05 |
| HORVU3Hr1G087700.1 | Barley | cytosol | 52.57 | 51.35 |
| Os01t0831200-01 | Rice | cytosol | 52.57 | 50.76 |
| KRH72721 | Soybean | cytosol | 53.75 | 50.75 |
| TraesCS3A01G350700.1 | Wheat | cytosol | 52.17 | 49.25 |
| TraesCS3B01G383300.1 | Wheat | cytosol | 51.78 | 48.88 |
| TraesCS3D01G344700.1 | Wheat | cytosol | 51.38 | 48.51 |
| CDX78039 | Canola | cytosol | 47.43 | 45.98 |
| CDX73692 | Canola | cytosol | 47.43 | 45.45 |
| AT3G51780.1 | Thale cress | cytosol | 48.22 | 45.35 |
| Bra006876.1-P | Field mustard | cytosol | 47.04 | 45.08 |
| GSMUA_Achr4P16720_001 | Banana | cytosol | 37.15 | 43.93 |
| Bra012837.1-P | Field mustard | cytosol | 35.18 | 40.45 |
| CDX90634 | Canola | cytosol | 35.18 | 40.45 |
| CDY29046 | Canola | cytosol | 34.39 | 37.99 |
| Solyc10g085290.1.1 | Tomato | cytosol | 48.62 | 35.24 |
| KRH11143 | Soybean | cytosol, plastid | 33.99 | 34.26 |
| KRH21104 | Soybean | cytosol, plastid | 33.6 | 33.6 |
| KRH38607 | Soybean | cytosol | 40.71 | 30.29 |
| KRG93982 | Soybean | cytosol, mitochondrion | 18.97 | 30.19 |
| KRH38609 | Soybean | cytosol, plastid | 41.11 | 29.46 |
| KRH09137 | Soybean | cytosol | 35.18 | 28.99 |
| KRH03982 | Soybean | cytosol | 31.23 | 28.83 |
| KRH09139 | Soybean | cytosol, plastid | 40.32 | 28.81 |
| KRH57254 | Soybean | cytosol | 31.23 | 28.73 |
| PGSC0003DMT400028657 | Potato | cytosol | 48.22 | 27.73 |
| KRH07081 | Soybean | cytosol, mitochondrion | 16.21 | 26.11 |
| KRG94376 | Soybean | cytosol, mitochondrion | 15.81 | 25.64 |
| KRH35375 | Soybean | cytosol | 27.27 | 25.56 |
| KRH44514 | Soybean | cytosol, plastid | 16.21 | 22.04 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:19.1.5.5 | Gene3D:3.10.20.90 | EMBL:ACUP02000545 | InterPro:BAG_dom_sf | InterPro:BAG_domain |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_01G123300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0051087 |
| UniProt:I1J7G7 | InterPro:IPR000626 | InterPro:IPR003103 | InterPro:IPR036533 | EnsemblPlants:KRH75994 | ProteinID:KRH75994 |
| ProteinID:KRH75994.1 | PFAM:PF00240 | PFAM:PF02179 | PFscan:PS50053 | PFscan:PS51035 | PANTHER:PTHR12329 |
| PANTHER:PTHR12329:SF21 | SMART:SM00264 | SUPFAM:SSF54236 | SUPFAM:SSF63491 | UniParc:UPI00023375E1 | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_dom | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:42526055..42535257
Molecular Weight (calculated)
27842.8 Da
IEP (calculated)
6.071
GRAVY (calculated)
-0.634
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNATDSAGK IPPETRPAES DSGGDSGPRP TIKINVMHGS SQHEFHLPAQ STFGDVKKLL VNKTGLEPVE QRLFFRGIEK GDNLHLHLEG VKDKSKLLLL
101: EGTASKERKL EETRKQNVMS KAFEAIAGVR AEVDKLSNRV TSIEVAINGG NKASEKEFLV LTELLMSQLL KLDGIEAEGE AKLQRKAEVN RVQNLVDKLD
201: SLKARNANPF SNSSNAVKVT TQWETFDSGM ESLDAPSDNP SSTKVTQEWE RFD
101: EGTASKERKL EETRKQNVMS KAFEAIAGVR AEVDKLSNRV TSIEVAINGG NKASEKEFLV LTELLMSQLL KLDGIEAEGE AKLQRKAEVN RVQNLVDKLD
201: SLKARNANPF SNSSNAVKVT TQWETFDSGM ESLDAPSDNP SSTKVTQEWE RFD
001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD
Arabidopsis Description
BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.