Factsheet for PGSC0003DMT400028657

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400019556
PGSC0003DMT400046670
PGSC0003DMT400069639

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51780.1	PGSC0003DMT400019556	AT4G24690.1	21798944
AT3G51780.1	PGSC0003DMT400046670	AT4G24690.1	21798944
AT3G51780.1	PGSC0003DMT400069639	AT4G24690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g085290.1.1	Tomato	cytosol	73.18	92.26
VIT_08s0058g00130.t01	Wine grape	cytosol	30.91	60.99
EES01703	Sorghum	cytosol	32.27	54.83
Zm00001d042985_P001	Maize	cytosol, extracellular	31.59	53.67
Zm00001d012460_P001	Maize	cytosol	28.86	52.7
GSMUA_AchrUn_...	Banana	cytosol	28.41	52.52
HORVU3Hr1G087700.1	Barley	cytosol	30.68	52.12
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	14.09	51.24
KRH49429	Soybean	cytosol	29.09	50.39
Os01t0831200-01	Rice	cytosol	29.77	50.0
TraesCS3D01G344700.1	Wheat	cytosol	30.23	49.63
TraesCS3B01G383300.1	Wheat	cytosol	29.77	48.88
KRH65641	Soybean	nucleus	27.73	48.8
CDX78039	Canola	cytosol	28.86	48.66
TraesCS3A01G350700.1	Wheat	cytosol	29.55	48.51
CDX73692	Canola	cytosol	29.09	48.48
KRH75994	Soybean	cytosol	27.73	48.22
Bra006876.1-P	Field mustard	cytosol	28.64	47.73
AT3G51780.1	Thale cress	cytosol	28.64	46.84
PGSC0003DMT400052944	Potato	cytosol	27.5	43.53
CDX90634	Canola	cytosol	20.45	40.91
Bra012837.1-P	Field mustard	cytosol	20.45	40.91
GSMUA_Achr4P16720_001	Banana	cytosol	19.32	39.72
PGSC0003DMT400017936	Potato	mitochondrion	11.36	39.37
CDY29046	Canola	cytosol	20.0	38.43
PGSC0003DMT400032912	Potato	mitochondrion	13.18	37.18
PGSC0003DMT400088988	Potato	cytosol	12.27	35.53
PGSC0003DMT400065070	Potato	cytosol	24.55	32.53
PGSC0003DMT400058588	Potato	cytosol	19.77	30.74
PGSC0003DMT400037124	Potato	cytosol	22.5	29.03

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:102605123	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626
InterPro:IPR003103	InterPro:IPR036533	UniProt:M1ARG9	PFAM:PF00240	PFAM:PF02179	EnsemblPlantsGene:PGSC0003DMG400011032
PGSC:PGSC0003DMG400011032	EnsemblPlants:PGSC0003DMT400028657	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF21
SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI000296CFF0	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom
RefSeq:XP_006338974.1	SEG:seg	:	:	:	:

Description

BCL-2 binding anthanogene-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400011032]

Coordinates

chr10:-:53788844..53795728

Molecular Weight (calculated)

46439.7 Da

IEP (calculated)

4.880

GRAVY (calculated)

-0.210

Length

440 amino acids

Sequence
(BLAST)

001: MKESIKSSTS SSDEAVWEIR PSGMLVQKRE NDAAANPTII IKVSYASQEF DLPVPPEFTF GEVKSILSSI IGLEPKVQKL LFRGKEKEDH EYLHLVGVKD
101: NSKVLVMEEE TVEEKIPEEV RVTTEISRGA EAVAEVRTEV DKLSEQVSAV QAVVFGGTNV EDKDIIHLTE MLIRQLLKLD GIEAAGEGRV QRKSEVRRVQ
201: NLVEAMDAVK ARNSNPFINN SNAVSVTTQW ETFESGVGSL NAPPPPRPVL EVGSMNTSSP PRPVLGVGSM NASPPPRPAF GVGGLNTQPP PTLVLGVGSM
301: NASPPPRPAF GVGGLNTQPP PTLVLGVGSM NASPPPRPAF GVGGLNTQPP PTLVLGVGSM NASPPPRPAF GVGGLNTQPP PTLVLGVGSM NASPPPRPVF
401: GVGGLNTPPP PTPMLGVGSL AAPPLRPPST IVTEDWEQFE

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.