Factsheet for PGSC0003DMT400088988

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017936	Potato	mitochondrion	32.89	39.37
VIT_10s0003g04270.t01	Wine grape	cytosol	61.84	36.72
KRH11143	Soybean	cytosol, plastid	59.21	35.86
PGSC0003DMT400032912	Potato	mitochondrion	36.18	35.26
KRH21104	Soybean	cytosol, plastid	57.24	34.39
GSMUA_Achr3P23280_001	Banana	cytosol	50.66	29.96
GSMUA_Achr7P03430_001	Banana	cytosol	45.39	27.49
Zm00001d002277_P001	Maize	plastid	44.74	25.37
EES11441	Sorghum	cytosol	45.39	25.37
TraesCS2A01G463500.1	Wheat	cytosol	43.42	24.54
TraesCS2D01G464700.1	Wheat	cytosol	43.42	24.54
TraesCS2B01G485500.1	Wheat	cytosol	43.42	24.44
HORVU2Hr1G103670.2	Barley	cytosol	41.45	23.95
HORVU2Hr1G103610.3	Barley	cytosol, mitochondrion	28.29	21.5
PGSC0003DMT400058588	Potato	cytosol	38.82	20.85
PGSC0003DMT400065070	Potato	cytosol	44.74	20.48
PGSC0003DMT400052944	Potato	cytosol	34.87	19.06
PGSC0003DMT400037124	Potato	cytosol	42.76	19.06
Os04t0619900-00	Rice	cytosol	35.53	15.38
PGSC0003DMT400028657	Potato	cytosol	35.53	12.27

Protein Annotations

EnsemblPlants:PGSC0003DMT400088988	EnsemblPlantsGene:PGSC0003DMG400038559	Gene3D:1.20.58.120	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0051087	InterPro:BAG_dom_sf	InterPro:IPR000626	InterPro:IPR036533	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_dom	PANTHER:PTHR12329	PANTHER:PTHR12329:SF17	PFAM:PF00240	PFscan:PS50053	PGSC:PGSC0003DMG400038559
SUPFAM:SSF54236	UniParc:UPI0002961C53	UniProt:M1DH70	MapMan:19.1.5.5	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400038559]

Coordinates

chr8:+:28443771..28445140

Molecular Weight (calculated)

17426.8 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.633

Length

152 amino acids

Sequence
(BLAST)

001: MPTAAGDDGD LKEEVIEWEM RPGGMLVQRR SDNSDIPIAQ NLRIRVAYDA ARYDISINPH ATFGELKKVL REEIGLEAGE QRIIWRGKER ENGEYLDMCG
101: VKDRSKVMLI EDPASEEKRF IQMRKNAKIQ ATYHFINDVS IHIDKLAQQV PS

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.