Factsheet for PGSC0003DMT400058588

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g080320.2.1	Tomato	cytosol, plastid	94.35	96.74
Zm00001d035816_P001	Maize	cytosol, plastid	28.27	48.19
KRH03982	Soybean	cytosol	45.23	46.72
GSMUA_Achr3P12380_001	Banana	cytosol	44.88	46.52
KRH57254	Soybean	cytosol	44.52	45.82
GSMUA_Achr4P19700_001	Banana	cytosol	41.34	45.7
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	25.44	45.0
VIT_16s0100g00470.t01	Wine grape	cytosol	54.06	44.61
PGSC0003DMT400037124	Potato	cytosol	51.59	42.82
PGSC0003DMT400065070	Potato	cytosol	49.82	42.47
GSMUA_Achr1P18860_001	Banana	cytosol	41.7	41.55
GSMUA_Achr1P07950_001	Banana	cytosol	43.11	41.08
GSMUA_Achr3P14600_001	Banana	cytosol	41.7	40.0
GSMUA_Achr7P05880_001	Banana	cytosol	44.88	38.84
PGSC0003DMT400088988	Potato	cytosol	20.85	38.82
KXG36034	Sorghum	cytosol	42.76	36.45
Zm00001d021221_P001	Maize	cytosol	42.76	36.23
Zm00001d031732_P001	Maize	cytosol	40.64	35.94
Zm00001d018265_P001	Maize	cytosol	39.22	35.46
Os09t0524800-01	Rice	cytosol, mitochondrion	41.7	35.33
Zm00001d052733_P001	Maize	cytosol	38.52	35.28
EES14129	Sorghum	cytosol	40.99	35.26
Os08t0546100-00	Rice	cytosol	39.22	35.13
TraesCS5A01G312500.1	Wheat	cytosol	41.7	34.71
HORVU7Hr1G056700.2	Barley	cytosol	39.58	34.67
TraesCS7A01G269600.2	Wheat	cytosol	39.58	34.67
TraesCS5D01G319300.2	Wheat	cytosol	42.76	34.47
TraesCS7B01G167800.1	Wheat	cytosol	39.22	34.37
TraesCS7D01G270100.1	Wheat	cytosol	39.22	34.37
Os06t0126500-01	Rice	cytosol	40.99	34.22
Zm00001d035999_P002	Maize	mitochondrion	38.16	34.18
HORVU5Hr1G080500.1	Barley	cytosol	42.05	34.1
TraesCS5B01G313500.1	Wheat	cytosol	42.05	33.62
Zm00001d045513_P001	Maize	cytosol, mitochondrion	37.81	33.23
EER87751	Sorghum	cytosol	40.64	33.14
PGSC0003DMT400052944	Potato	cytosol	32.51	33.09
HORVU5Hr1G080560.1	Barley	peroxisome	32.51	32.97
Zm00001d006173_P001	Maize	cytosol	40.64	32.95
PGSC0003DMT400017936	Potato	mitochondrion	14.49	32.28
PGSC0003DMT400032912	Potato	mitochondrion	16.61	30.13
TraesCS7D01G050300.1	Wheat	cytosol	34.63	28.99
TraesCS7A01G055400.1	Wheat	mitochondrion	35.34	28.99
HORVU7Hr1G010230.1	Barley	mitochondrion	35.34	28.01
TraesCS4A01G442100.1	Wheat	mitochondrion	34.63	27.92
PGSC0003DMT400028657	Potato	cytosol	30.74	19.77

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:102606009	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626
InterPro:IPR003103	InterPro:IPR036533	UniProt:M1C2X8	PFAM:PF00240	PFAM:PF02179	EnsemblPlantsGene:PGSC0003DMG400022760
PGSC:PGSC0003DMG400022760	EnsemblPlants:PGSC0003DMT400058588	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF11
SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI000295FDA1	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom
RefSeq:XP_006358866.1	SEG:seg	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400022760]

Coordinates

chr8:-:54010593..54013349

Molecular Weight (calculated)

32236.2 Da

IEP (calculated)

10.344

GRAVY (calculated)

-0.650

Length

283 amino acids

Sequence
(BLAST)

001: MSKELLRMKT KKPNGNGLSS SGWEMRPGGM LVQKRSSDHN SNQSSNIVVP IIRLKVKYGS SYHEVKISSQ ATFGELKKML AGPTGLHTED QKIFYKEKEK
101: DSRNFLDVSG IKDGSKLVLI EDEISKEKRY LESRRNAKME NASKDITSIR LEIDKLAKQV ANVEMDIYGG KKVTETLLLS LIELLMTQLI KLDGITADGD
201: LKLQRRMQVK RVQKYIETLD MLKIRNSALG NDNAKVSMNH KNRIFTGQMP KSIYYQQEQR KMGNFADERS PGPVVVTTKW ETF

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.