Factsheet for TraesCS5B01G313500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6D01G402500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07220.1	TraesCS6D01G402500.1	AT5G02500.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G319300.2	Wheat	cytosol	95.2	96.01
TraesCS5A01G312500.1	Wheat	cytosol	91.24	95.0
HORVU5Hr1G080500.1	Barley	cytosol	89.83	91.12
KXG36034	Sorghum	cytosol	72.6	77.41
Zm00001d021221_P001	Maize	cytosol	72.88	77.25
Os09t0524800-01	Rice	cytosol, mitochondrion	70.9	75.15
Zm00001d018265_P001	Maize	cytosol	65.54	74.12
Zm00001d035816_P001	Maize	cytosol, plastid	34.46	73.49
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	31.92	70.62
Zm00001d006173_P001	Maize	cytosol	67.23	68.19
TraesCS7B01G167800.1	Wheat	cytosol	60.45	66.25
HORVU5Hr1G080560.1	Barley	peroxisome	48.59	61.65
GSMUA_Achr3P12380_001	Banana	cytosol	46.05	59.71
GSMUA_Achr3P14600_001	Banana	cytosol	47.74	57.29
GSMUA_Achr1P07950_001	Banana	cytosol	48.02	57.24
GSMUA_Achr4P19700_001	Banana	cytosol	41.24	57.03
GSMUA_Achr1P18860_001	Banana	cytosol	42.66	53.17
GSMUA_Achr7P05880_001	Banana	cytosol	47.74	51.68
KRH09137	Soybean	cytosol	40.11	46.25
VIT_16s0100g00470.t01	Wine grape	cytosol	44.07	45.48
KRH38607	Soybean	cytosol	43.22	45.0
Bra009283.1-P	Field mustard	cytosol, plastid	38.98	44.95
CDX70017	Canola	cytosol	38.98	44.95
AT5G07220.1	Thale cress	cytosol	38.42	44.88
CDX98996	Canola	cytosol	38.7	44.77
KRH38609	Soybean	cytosol, plastid	44.35	44.48
KRH09139	Soybean	cytosol, plastid	44.35	44.35
PGSC0003DMT400037124	Potato	cytosol	42.37	43.99
PGSC0003DMT400065070	Potato	cytosol	40.96	43.67
Solyc06g035720.2.1	Tomato	cytosol	40.68	43.64
Solyc03g026220.2.1	Tomato	cytosol	41.81	43.4
CDY38897	Canola	cytosol	40.11	43.29
Bra029142.1-P	Field mustard	cytosol	40.11	43.29
CDY68101	Canola	cytosol	39.83	43.25
AT5G62100.1	Thale cress	cytosol	35.88	42.91
Solyc08g080320.2.1	Tomato	cytosol, plastid	33.33	42.75
CDY30692	Canola	cytosol	35.59	42.42
CDY30694	Canola	cytosol	35.59	42.42
CDY67495	Canola	cytosol	38.98	42.2
Bra029288.1-P	Field mustard	cytosol	35.31	42.09
PGSC0003DMT400058588	Potato	cytosol	33.62	42.05
CDY27085	Canola	cytosol	38.7	41.9
AT5G52060.1	Thale cress	cytosol	39.55	40.94
TraesCS2B01G485500.1	Wheat	cytosol	31.07	40.74
KRH57254	Soybean	cytosol	31.36	40.36
KRH03982	Soybean	cytosol	31.07	40.15
Bra022577.1-P	Field mustard	cytosol	39.27	39.71
TraesCS3B01G383300.1	Wheat	cytosol	28.53	37.69
KRH35375	Soybean	cytosol	25.71	33.7
KRH44514	Soybean	cytosol, plastid	17.51	33.33
TraesCS2B01G360600.1	Wheat	mitochondrion	14.97	30.99
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	14.41	30.18
TraesCS6B01G240800.1	Wheat	mitochondrion	13.84	29.88
TraesCS3B01G422300.1	Wheat	mitochondrion	12.71	27.78
TraesCS3B01G422400.1	Wheat	mitochondrion	12.43	27.16

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PANTHER:PTHR12329	PANTHER:PTHR12329:SF30	SUPFAM:SSF54236
SUPFAM:SSF63491	EnsemblPlantsGene:TraesCS5B01G313500	EnsemblPlants:TraesCS5B01G313500.1	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	TIGR:cd01812
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:495827681..495829064

Molecular Weight (calculated)

38146.6 Da

IEP (calculated)

10.394

GRAVY (calculated)

-0.540

Length

354 amino acids

Sequence
(BLAST)

001: MMRAKGKATF LDAMKETTSP VSPAAAAAAK EALKEDEWEV RPGGMLVQKR DPDSDAPAGA PVPTVRLKVK FNGVSHEIYI NSQASFGELK KMMSEKTGLH
101: HEDQKVLYKG KEMDSKAFLD ISGVKDRSKL VMLEDPDAQA KRLIEQRRAD KAPRASKSVS RISLDVDKLA TKVSALDTIV RKGGKVVEAD VVALTEALMT
201: ELVKLDAIAA DGEVKAQRRL QEKRVQKYVE TLDVIRAKNA SAPTANGHVK NAAAPKANGN GNGQAKGDRS LHLPPRPPPV SQRRQFKQQP APANGKAAAA
301: PPTASWETFD LLSSMPSTSS ATATTTMAAA TTTTKPATNN NTTSPIPRFD WELF

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.