CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38609	Soybean	cytosol, plastid	90.4	90.65
KRH38607	Soybean	cytosol	85.88	89.41
KRH09137	Soybean	cytosol	70.62	81.43
GSMUA_Achr3P12380_001	Banana	cytosol	46.89	60.81
PGSC0003DMT400065070	Potato	cytosol	56.78	60.54
Solyc06g035720.2.1	Tomato	cytosol	55.93	60.0
PGSC0003DMT400037124	Potato	cytosol	57.34	59.53
Solyc03g026220.2.1	Tomato	cytosol	57.34	59.53
Zm00001d035816_P001	Maize	cytosol, plastid	27.4	58.43
GSMUA_Achr4P19700_001	Banana	cytosol	41.81	57.81
GSMUA_Achr1P07950_001	Banana	cytosol	47.74	56.9
GSMUA_Achr3P14600_001	Banana	cytosol	46.61	55.93
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	25.14	55.62
GSMUA_Achr1P18860_001	Banana	cytosol	43.79	54.58
GSMUA_Achr7P05880_001	Banana	cytosol	50.28	54.43
KRH35375	Soybean	cytosol	38.98	51.11
Zm00001d018265_P001	Maize	cytosol	44.07	49.84
KXG36034	Sorghum	cytosol	46.61	49.7
HORVU7Hr1G056700.2	Barley	cytosol	45.2	49.54
Zm00001d021221_P001	Maize	cytosol	46.61	49.4
TraesCS7B01G167800.1	Wheat	cytosol	44.92	49.23
TraesCS7A01G269600.2	Wheat	cytosol	44.92	49.23
TraesCS7D01G270100.1	Wheat	cytosol	44.35	48.61
Os08t0546100-00	Rice	cytosol	43.22	48.42
KRH11143	Soybean	cytosol, plastid	34.18	48.21
Os09t0524800-01	Rice	cytosol, mitochondrion	45.2	47.9
KRH03982	Soybean	cytosol	36.44	47.08
Zm00001d052733_P001	Maize	cytosol	40.96	46.93
KRH57254	Soybean	cytosol	36.44	46.91
Zm00001d031732_P001	Maize	cytosol	42.37	46.88
KRH21104	Soybean	cytosol, plastid	33.33	46.64
EES14129	Sorghum	cytosol	42.94	46.2
TraesCS5A01G312500.1	Wheat	cytosol	44.35	46.18
HORVU5Hr1G080500.1	Barley	cytosol	45.2	45.85
Zm00001d006173_P001	Maize	cytosol	44.92	45.56
TraesCS5D01G319300.2	Wheat	cytosol	44.92	45.3
TraesCS5B01G313500.1	Wheat	cytosol	44.35	44.35
Os06t0126500-01	Rice	cytosol	41.53	43.36
EER87751	Sorghum	cytosol	42.37	43.23
Zm00001d045513_P001	Maize	cytosol, mitochondrion	38.42	42.24
Zm00001d035999_P002	Maize	mitochondrion	37.57	42.09
KRH72721	Soybean	cytosol	31.36	41.42
KRH49429	Soybean	cytosol	29.66	41.34
HORVU5Hr1G080560.1	Barley	peroxisome	32.49	41.22
KRH75994	Soybean	cytosol	28.81	40.32
KRH65641	Soybean	nucleus	28.25	40.0
TraesCS7D01G050300.1	Wheat	cytosol	36.16	37.87
KRH44514	Soybean	cytosol, plastid	19.49	37.1
TraesCS7A01G055400.1	Wheat	mitochondrion	35.88	36.81
KRG93982	Soybean	cytosol, mitochondrion	16.38	36.48
KRH07081	Soybean	cytosol, mitochondrion	16.1	36.31
HORVU7Hr1G010230.1	Barley	mitochondrion	36.44	36.13
TraesCS4A01G442100.1	Wheat	mitochondrion	35.31	35.61
KRG94376	Soybean	cytosol, mitochondrion	15.54	35.26

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100819022	MapMan:19.1.5.5	Gene3D:3.10.20.90	EMBL:ACUP02010271	InterPro:BAG_dom_sf
InterPro:BAG_domain	EnsemblPlantsGene:GLYMA_16G198600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087
UniProt:I1MQ22	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	EnsemblPlants:KRH09139	ProteinID:KRH09139
ProteinID:KRH09139.1	PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PFscan:PS51257
PANTHER:PTHR12329	PANTHER:PTHR12329:SF31	SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI00023D618D
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:35958085..35960833

Molecular Weight (calculated)

39678.4 Da

IEP (calculated)

9.837

GRAVY (calculated)

-0.746

Length

354 amino acids

Sequence
(BLAST)

001: MMKMKNISSS NNNNRTNGLS SIMNGGGSGG CRSEPGSKEW EMRPGGMLVQ MRTADSDRNP ALVPTIRVRV KYGSIYHEVN ISSQATFGEL KKMLSGPTGL
101: HHEDQKLLYK DKERDSKAFL DMVGVKDKSK IVLMEDPISQ EKRLLERRKN AKMEKAAKSI SEISLEIDRL AGRVSAFESI ISKGGKVVET DVHNLIELLM
201: NQLLKLDGIM ADGDVKLQRK MQVKRVQKYV ETLDVLKVKN SMPSSNGDHA PVQPQQKHSN GQQQKYSNGH HRLALVPIQE QQQEQPRNSN ENSLELYQEQ
301: QHQPSRNSTS GVVVTTNWEL FDSVPPLIPV QSTSPPSSVT NNSGPPKFNW EFFD

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.