Factsheet for PGSC0003DMT400065070

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g035720.2.1	Tomato	cytosol	96.08	96.67
PGSC0003DMT400037124	Potato	cytosol	72.29	70.38
KRH09137	Soybean	cytosol	53.92	58.31
VIT_16s0100g00470.t01	Wine grape	cytosol	59.94	58.02
GSMUA_Achr4P19700_001	Banana	cytosol	44.58	57.81
GSMUA_Achr3P12380_001	Banana	cytosol	46.99	57.14
KRH09139	Soybean	cytosol, plastid	60.54	56.78
KRH38607	Soybean	cytosol	56.93	55.59
Zm00001d035816_P001	Maize	cytosol, plastid	27.71	55.42
KRH38609	Soybean	cytosol, plastid	58.73	55.24
GSMUA_Achr1P07950_001	Banana	cytosol	47.59	53.2
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	25.6	53.12
GSMUA_Achr3P14600_001	Banana	cytosol	46.39	52.2
GSMUA_Achr1P18860_001	Banana	cytosol	43.67	51.06
PGSC0003DMT400058588	Potato	cytosol	42.47	49.82
GSMUA_Achr7P05880_001	Banana	cytosol	47.59	48.32
Zm00001d018265_P001	Maize	cytosol	43.98	46.65
KXG36034	Sorghum	cytosol	46.39	46.39
Os08t0546100-00	Rice	cytosol	43.67	45.89
HORVU7Hr1G056700.2	Barley	cytosol	44.58	45.82
TraesCS7A01G269600.2	Wheat	cytosol	44.58	45.82
Zm00001d021221_P001	Maize	cytosol	46.08	45.81
TraesCS7D01G270100.1	Wheat	cytosol	44.28	45.51
Zm00001d052733_P001	Maize	cytosol	42.17	45.31
Os09t0524800-01	Rice	cytosol, mitochondrion	45.48	45.21
TraesCS7B01G167800.1	Wheat	cytosol	43.98	45.2
PGSC0003DMT400088988	Potato	cytosol	20.48	44.74
Zm00001d031732_P001	Maize	cytosol	43.07	44.69
EES14129	Sorghum	cytosol	43.07	43.47
Zm00001d006173_P001	Maize	cytosol	44.88	42.69
TraesCS5A01G312500.1	Wheat	cytosol	43.07	42.06
TraesCS5D01G319300.2	Wheat	cytosol	43.98	41.6
HORVU5Hr1G080500.1	Barley	cytosol	43.37	41.26
Os06t0126500-01	Rice	cytosol	41.87	41.0
TraesCS5B01G313500.1	Wheat	cytosol	43.67	40.96
Zm00001d035999_P002	Maize	mitochondrion	38.86	40.82
Zm00001d045513_P001	Maize	cytosol, mitochondrion	39.16	40.37
EER87751	Sorghum	cytosol	41.87	40.06
HORVU5Hr1G080560.1	Barley	peroxisome	32.53	38.71
PGSC0003DMT400017936	Potato	mitochondrion	14.76	38.58
TraesCS7D01G050300.1	Wheat	cytosol	38.55	37.87
TraesCS7A01G055400.1	Wheat	mitochondrion	38.55	37.1
TraesCS4A01G442100.1	Wheat	mitochondrion	37.65	35.61
HORVU7Hr1G010230.1	Barley	mitochondrion	38.25	35.57
PGSC0003DMT400032912	Potato	mitochondrion	16.57	35.26
PGSC0003DMT400052944	Potato	cytosol	28.31	33.81
PGSC0003DMT400028657	Potato	cytosol	32.53	24.55

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103
InterPro:IPR036533	UniProt:M1CDC5	PFAM:PF00240	PFAM:PF02179	EnsemblPlantsGene:PGSC0003DMG400025283	PGSC:PGSC0003DMG400025283
EnsemblPlants:PGSC0003DMT400065070	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF11	SMART:SM00264
SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI000295F67A	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400025283]

Coordinates

chr6:-:36880610..36883841

Molecular Weight (calculated)

37287.4 Da

IEP (calculated)

10.021

GRAVY (calculated)

-0.754

Length

332 amino acids

Sequence
(BLAST)

001: MGMKTRTTGM PSIMKGSSVG SENEWELRPS GMLVQKRNPD SENRPPPPTI RVRVKYRSVY HEINISSQAT FGELKKMLSG PTGLHHEDQK LLYKDKEREN
101: KTFLDIAGVK DKSKIVLIED PISQEKRYLE MRKNAKVEKA AKTISDISLE VDRLARQVSA LESVVSKGGK VVEKDVINLT ELLMNQLLQL DGIVAEGDIK
201: LQRKNQVRKV QKCVETLDVL KIKNSMPTNN GNHTPKDQSP PARPHQDYMY SNEQASSPVQ QHQDRHSFAN SPVKSKQQHQ SRHSTSGSVV ITTQWETFDS
301: TPAPLLDHFS SPTTTSSTHA AAAQSRISWD LL

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.