Factsheet for VIT_16s0100g00470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g035720.2.1	Tomato	cytosol	57.73	60.0
PGSC0003DMT400065070	Potato	cytosol	58.02	59.94
GSMUA_Achr3P12380_001	Banana	cytosol	47.52	59.71
CDY68101	Canola	cytosol	55.39	58.28
Bra029142.1-P	Field mustard	cytosol	55.69	58.23
CDY38897	Canola	cytosol	55.69	58.23
PGSC0003DMT400037124	Potato	cytosol	57.73	58.06
Solyc03g026220.2.1	Tomato	cytosol	57.73	58.06
Zm00001d035816_P001	Maize	cytosol, plastid	27.7	57.23
GSMUA_Achr4P19700_001	Banana	cytosol	42.27	56.64
AT5G52060.1	Thale cress	cytosol	55.98	56.14
AT5G07220.1	Thale cress	cytosol	49.27	55.78
GSMUA_Achr1P07950_001	Banana	cytosol	48.1	55.56
CDX70017	Canola	cytosol	49.56	55.37
CDY67495	Canola	cytosol	52.77	55.35
CDX98996	Canola	cytosol	49.27	55.23
Solyc08g080320.2.1	Tomato	cytosol, plastid	44.31	55.07
Bra009283.1-P	Field mustard	cytosol, plastid	49.27	55.05
CDY27085	Canola	cytosol	52.48	55.05
GSMUA_Achr3P14600_001	Banana	cytosol	47.23	54.92
PGSC0003DMT400058588	Potato	cytosol	44.61	54.06
AT5G62100.1	Thale cress	cytosol	46.65	54.05
CDY30692	Canola	cytosol	46.65	53.87
CDY30694	Canola	cytosol	46.65	53.87
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	25.07	53.75
Bra029288.1-P	Field mustard	cytosol	46.36	53.54
GSMUA_Achr7P05880_001	Banana	cytosol	51.02	53.52
GSMUA_Achr1P18860_001	Banana	cytosol	44.02	53.17
Bra022577.1-P	Field mustard	cytosol	53.94	52.86
VIT_10s0003g04270.t01	Wine grape	cytosol	38.78	51.95
Zm00001d052733_P001	Maize	cytosol	44.02	48.87
Zm00001d018265_P001	Maize	cytosol	44.02	48.24
Os08t0546100-00	Rice	cytosol	44.02	47.78
Zm00001d021221_P001	Maize	cytosol	46.36	47.6
KXG36034	Sorghum	cytosol	46.06	47.59
Zm00001d031732_P001	Maize	cytosol	44.02	47.19
VIT_08s0058g00130.t01	Wine grape	cytosol	30.32	46.64
HORVU7Hr1G056700.2	Barley	cytosol	43.73	46.44
Os09t0524800-01	Rice	cytosol, mitochondrion	45.19	46.41
TraesCS5A01G312500.1	Wheat	cytosol	45.77	46.18
TraesCS7A01G269600.2	Wheat	cytosol	43.44	46.13
TraesCS7D01G270100.1	Wheat	cytosol	42.86	45.51
TraesCS7B01G167800.1	Wheat	cytosol	42.86	45.51
EES14129	Sorghum	cytosol	43.44	45.29
HORVU5Hr1G080500.1	Barley	cytosol	46.06	45.27
Zm00001d006173_P001	Maize	cytosol	45.48	44.7
TraesCS5D01G319300.2	Wheat	cytosol	45.48	44.44
TraesCS5B01G313500.1	Wheat	cytosol	45.48	44.07
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	15.45	43.8
Os06t0126500-01	Rice	cytosol	42.57	43.07
Zm00001d035999_P002	Maize	mitochondrion	39.65	43.04
VIT_06s0004g06960.t01	Wine grape	cytosol	29.45	42.44
VIT_14s0219g00210.t01	Wine grape	cytosol	18.08	42.18
EER87751	Sorghum	cytosol	42.57	42.07
Zm00001d045513_P001	Maize	cytosol, mitochondrion	39.07	41.61
HORVU5Hr1G080560.1	Barley	peroxisome	32.65	40.14
TraesCS7D01G050300.1	Wheat	cytosol	39.07	39.65
KRH44514	Soybean	cytosol, plastid	20.99	38.71
TraesCS7A01G055400.1	Wheat	mitochondrion	37.9	37.68
HORVU7Hr1G010230.1	Barley	mitochondrion	38.78	37.25
TraesCS4A01G442100.1	Wheat	mitochondrion	37.61	36.75

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100260667	wikigene:100260667	MapMan:19.1.5.5	Gene3D:3.10.20.90	EMBL:AM463096
InterPro:BAG_dom_sf	InterPro:BAG_domain	ProteinID:CAN63593	ProteinID:CAN63593.1	ProteinID:CCB56470	ProteinID:CCB56470.1
UniProt:F6HP64	EMBL:FN596000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087
InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	EntrezGene:LOC100260667	wikigene:LOC100260667	PFAM:PF02179
PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF11	SMART:SM00264	SUPFAM:SSF54236
SUPFAM:SSF63491	TIGR:TC60045	UniParc:UPI00015CCC5C	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	ArrayExpress:VIT_16s0100g00470
EnsemblPlantsGene:VIT_16s0100g00470	EnsemblPlants:VIT_16s0100g00470.t01	unigene:Vvi.11763	RefSeq:XP_002279827	RefSeq:XP_002279827.1	SEG:seg

Description

No Description!

Coordinates

chr16:-:15947137..15949454

Molecular Weight (calculated)

38131.8 Da

IEP (calculated)

10.034

GRAVY (calculated)

-0.628

Length

343 amino acids

Sequence
(BLAST)

001: MMRVKNKPAG LSSINGGSAG DGGESGPVEW ELRPGGMLVQ RRDPDSDRSS VPAPTIRVRV KFGSIYHEIY ISSQATFGEL KKMLSGPTGL HHQDQKLLFK
101: DKERDSNAYL DMAGVKDRSK ILLVEDPISQ EKRYLEMRRN AKMEKASKSI SEISLEVDRL AGQVSALESV ISKGGKVAEK VMLNLTELLM NQLINLDSII
201: ADGDVKLQRK MQVRRVQKYV ETLDMLKIKN STPDSDGDQM PMQHQQKRQS NGQRPPPAAP PLVQQLQQPR HSVAHLPIQM HQQQQQPPQP SRHSTSGPVV
301: VTTKWETFDS ASAPPLVSAP PTSVTTAANI NPVHPKLNWE FFD

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.