Factsheet for VIT_10s0003g04270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11143	Soybean	cytosol, plastid	69.53	70.92
KRH21104	Soybean	cytosol, plastid	67.58	68.38
GSMUA_Achr3P23280_001	Banana	cytosol	65.23	64.98
GSMUA_Achr7P03430_001	Banana	cytosol	61.72	62.95
PGSC0003DMT400088988	Potato	cytosol	36.72	61.84
HORVU2Hr1G103610.3	Barley	cytosol, mitochondrion	44.53	57.0
Zm00001d002277_P001	Maize	plastid	56.64	54.1
TraesCS2A01G463500.1	Wheat	cytosol	55.47	52.79
TraesCS2D01G464700.1	Wheat	cytosol	55.47	52.79
TraesCS2B01G485500.1	Wheat	cytosol	55.47	52.59
EES11441	Sorghum	cytosol	55.86	52.57
HORVU2Hr1G103670.2	Barley	cytosol	53.12	51.71
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	21.48	45.45
VIT_08s0058g00130.t01	Wine grape	cytosol	37.89	43.5
VIT_06s0004g06960.t01	Wine grape	cytosol	39.06	42.02
VIT_14s0219g00210.t01	Wine grape	cytosol	23.83	41.5
VIT_16s0100g00470.t01	Wine grape	cytosol	51.95	38.78
Os04t0619900-00	Rice	cytosol	28.52	20.8

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100266950	wikigene:100266950	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf
InterPro:BAG_domain	ProteinID:CCB55829	ProteinID:CCB55829.1	UniProt:F6HLV4	EMBL:FN595992	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
EntrezGene:LOC100266950	wikigene:LOC100266950	PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PANTHER:PTHR12329
PANTHER:PTHR12329:SF17	SMART:SM00213	SUPFAM:SSF54236	SUPFAM:SSF63491	TIGR:TC52952	UniParc:UPI00015CB02D
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	ArrayExpress:VIT_10s0003g04270	EnsemblPlantsGene:VIT_10s0003g04270	EnsemblPlants:VIT_10s0003g04270.t01	RefSeq:XP_002280537
RefSeq:XP_002280537.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:7350493..7353025

Molecular Weight (calculated)

28519.3 Da

IEP (calculated)

8.040

GRAVY (calculated)

-0.508

Length

256 amino acids

Sequence
(BLAST)

001: MMKGRSDYSG CMSEGSATTT SSTSKDEEIE WEMRPGGMLV QKRTEKSDSL APNLLIRVAY GALRYEISVN SQATFGELKK LLTAETGLQP GEQRLIFRGK
101: ERENGDYLDM CGVKGRSKVI LMEDPSSRER RAIEMRRNAK IQTAHRAISD VSMEVDKLAE QVSAIEKSIS NGTKVPEVQI TTLIEMLMRQ AIKLDGIAAE
201: GDASAQKNLQ GKRVQKCVET LDVLKISNGK VKPVIVTTKW ETFDPPPTTA HWEFFD

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.