Factsheet for VIT_06s0004g06960.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0058g00130.t01	Wine grape	cytosol	62.6	66.82
GSMUA_AchrUn_...	Banana	cytosol	63.45	63.45
KRH72721	Soybean	cytosol	70.59	62.69
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	29.41	57.85
Zm00001d012460_P001	Maize	cytosol	56.3	55.6
Zm00001d042985_P001	Maize	cytosol, extracellular	59.66	54.83
EES01703	Sorghum	cytosol	59.66	54.83
HORVU3Hr1G087700.1	Barley	cytosol	55.88	51.35
PGSC0003DMT400052944	Potato	cytosol	59.24	50.72
Solyc06g007240.2.1	Tomato	cytosol	57.98	49.64
TraesCS3B01G383300.1	Wheat	cytosol	55.04	48.88
TraesCS3D01G344700.1	Wheat	cytosol	55.04	48.88
TraesCS3A01G350700.1	Wheat	cytosol	55.04	48.88
Os01t0831200-01	Rice	cytosol	53.78	48.85
GSMUA_Achr4P16720_001	Banana	cytosol	43.7	48.6
VIT_10s0003g04270.t01	Wine grape	cytosol	42.02	39.06
VIT_14s0219g00210.t01	Wine grape	cytosol	23.11	37.41
VIT_16s0100g00470.t01	Wine grape	cytosol	42.44	29.45

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:100260376	wikigene:100260376	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf
InterPro:BAG_domain	ProteinID:CBI15919	ProteinID:CBI15919.3	ncoils:Coil	UniProt:D7SJU3	EMBL:FN594951
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103
InterPro:IPR036533	EntrezGene:LOC100260376	wikigene:LOC100260376	PFAM:PF00240	PFAM:PF02179	PFscan:PS50053
PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF21	SMART:SM00264	SUPFAM:SSF54236	SUPFAM:SSF63491
UniParc:UPI0001BE1186	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	ArrayExpress:VIT_06s0004g06960	EnsemblPlantsGene:VIT_06s0004g06960	EnsemblPlants:VIT_06s0004g06960.t01
unigene:Vvi.20179	RefSeq:XP_002278599	RefSeq:XP_002278599.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:7674754..7678369

Molecular Weight (calculated)

26635.2 Da

IEP (calculated)

7.064

GRAVY (calculated)

-0.318

Length

238 amino acids

Sequence
(BLAST)

001: MLVQKRNAGD AASSPMIKIK VSHGSYHHYI TIPAQSTFGD LKRVLAHETG LEPKEQRLLF RGKEKENDEC LHMVGVKEMS KVILLEDPAS KEKKLEEMKK
101: DQGILKAYEA VALVRVEVDK LSEKIVALER AVRGGNKVVD KEFVVLTELL MVQLLQLDTI EADGEAKVQR RIEVCRIQSF VDTLDNLKAR NSNPFNNSTN
201: AVSVTTKWVA FESGIGSLSA PTPLQSSTKI TQDWELFD

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.