Factsheet for GSMUA_Achr4P16720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P01840_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51780.1	GSMUA_Achr9P01840_001	AT4G24690.1	21798944
AT3G51780.1	GSMUA_AchrUn_...	AT4G24690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	58.88	52.94
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	26.17	46.28
KRH72721	Soybean	cytosol	55.14	44.03
VIT_06s0004g06960.t01	Wine grape	cytosol	48.6	43.7
EES01703	Sorghum	cytosol	50.47	41.7
Zm00001d042985_P001	Maize	cytosol, extracellular	49.53	40.93
VIT_08s0058g00130.t01	Wine grape	cytosol	42.52	40.81
HORVU3Hr1G087700.1	Barley	cytosol	48.6	40.15
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	28.04	39.47
Zm00001d012460_P001	Maize	cytosol	44.39	39.42
Os01t0831200-01	Rice	cytosol	47.66	38.93
TraesCS3B01G383300.1	Wheat	cytosol	47.2	37.69
TraesCS3D01G344700.1	Wheat	cytosol	46.73	37.31
TraesCS3A01G350700.1	Wheat	cytosol	46.73	37.31
KRH75994	Soybean	cytosol	43.93	37.15
GSMUA_AchrUn_...	Banana	cytosol	26.17	37.09
KRH65641	Soybean	nucleus	42.99	36.8
Solyc06g007240.2.1	Tomato	cytosol	47.66	36.69
PGSC0003DMT400052944	Potato	cytosol	47.66	36.69
KRH49429	Soybean	cytosol	43.46	36.61
CDX78039	Canola	cytosol	41.12	33.72
CDX73692	Canola	cytosol	41.12	33.33
Bra006876.1-P	Field mustard	cytosol	40.19	32.58
CDX90634	Canola	cytosol	32.71	31.82
Bra012837.1-P	Field mustard	cytosol	32.71	31.82
AT3G51780.1	Thale cress	cytosol	39.72	31.6
GSMUA_Achr7P03430_001	Banana	cytosol	36.92	31.47
GSMUA_Achr3P23280_001	Banana	cytosol	36.92	30.74
CDY29046	Canola	cytosol	32.71	30.57
GSMUA_Achr3P12380_001	Banana	cytosol	36.92	28.94
GSMUA_Achr4P19700_001	Banana	cytosol	32.71	27.34
GSMUA_Achr1P07950_001	Banana	cytosol	37.38	26.94
GSMUA_Achr1P18860_001	Banana	cytosol	32.71	24.65
GSMUA_Achr3P14600_001	Banana	cytosol	33.64	24.41
Solyc10g085290.1.1	Tomato	cytosol	39.72	24.36
GSMUA_Achr7P05880_001	Banana	cytosol	35.05	22.94
PGSC0003DMT400028657	Potato	cytosol	39.72	19.32

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	EnsemblPlantsGene:GSMUA_Achr4G16720_001	EnsemblPlants:GSMUA_Achr4P16720_001	EnsemblPlants:GSMUA_Achr4T16720_001
InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	UniProt:M0SPI6	PFAM:PF00240	PFAM:PF02179
PFscan:PS50053	PANTHER:PTHR12329	PANTHER:PTHR12329:SF21	SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI000295487E
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:	:

Description

BAG domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G16720_001]

Coordinates

chr4:-:15306950..15307748

Molecular Weight (calculated)

23682.4 Da

IEP (calculated)

8.255

GRAVY (calculated)

-0.503

Length

214 amino acids

Sequence
(BLAST)

001: MRKSRSNGMV GGRESQSCRM TEWELRPGGM VVQKRSNVAG MPTEPLIKIK VSHGSYQHQL SVPAHSTFGE LKRVLAQDTG LQPGEQRLLF RGKEKDDGER
101: LHMAGIVEMS KLVLLEDPAS KERKLERMNR HQASETIAAI GAAVDKLAAK VSSSETCVHA SMKAADEELA DLTELLMVQL LKSDSVEAEG EARTRRRFEV
201: LLNYETSLSS FSSN

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.