Factsheet for GSMUA_Achr7P03430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P23280_001	Banana	cytosol	76.49	74.71
VIT_10s0003g04270.t01	Wine grape	cytosol	62.95	61.72
HORVU2Hr1G103610.3	Barley	cytosol, mitochondrion	48.61	61.0
EES11441	Sorghum	cytosol	64.94	59.93
TraesCS2A01G463500.1	Wheat	cytosol	64.14	59.85
TraesCS2B01G485500.1	Wheat	cytosol	64.14	59.63
TraesCS2D01G464700.1	Wheat	cytosol	63.74	59.48
Zm00001d002277_P001	Maize	plastid	62.95	58.96
KRH11143	Soybean	cytosol, plastid	57.77	57.77
HORVU2Hr1G103670.2	Barley	cytosol	59.76	57.03
KRH21104	Soybean	cytosol, plastid	55.38	54.94
PGSC0003DMT400088988	Potato	cytosol	27.49	45.39
GSMUA_AchrUn_...	Banana	cytosol	41.04	43.28
GSMUA_Achr3P12380_001	Banana	cytosol	45.82	42.12
GSMUA_Achr4P19700_001	Banana	cytosol	40.24	39.45
GSMUA_Achr1P18860_001	Banana	cytosol	43.82	38.73
GSMUA_Achr4P16720_001	Banana	cytosol	31.47	36.92
GSMUA_Achr3P14600_001	Banana	cytosol	42.23	35.93
GSMUA_Achr1P07950_001	Banana	cytosol	41.83	35.35
GSMUA_Achr7P05880_001	Banana	cytosol	45.82	35.17
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	19.92	32.89
GSMUA_AchrUn_...	Banana	cytosol	19.52	32.45
Os04t0619900-00	Rice	cytosol	28.29	20.23

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	EnsemblPlantsGene:GSMUA_Achr7G03430_001	EnsemblPlants:GSMUA_Achr7P03430_001	EnsemblPlants:GSMUA_Achr7T03430_001
InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	UniProt:M0TED3	PFAM:PF00240	PFAM:PF02179
ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR12329	PANTHER:PTHR12329:SF17	SMART:SM00213	SUPFAM:SSF54236
SUPFAM:SSF63491	UniParc:UPI000294C3D1	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	SEG:seg

Description

Putative NEDD8-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G03430_001]

Coordinates

chr7:-:2740197..2743233

Molecular Weight (calculated)

28024.6 Da

IEP (calculated)

9.844

GRAVY (calculated)

-0.551

Length

251 amino acids

Sequence
(BLAST)

001: MMRRSGSEGG SSGGSAEEMW GEAAGWEMRP GGLLVQQRAP VPGRPPPPQV RVRISYGAAR YEVSVSSVAT FGELKKLLTA DSGLQPAEQR LLYKGKQRGD
101: TEYLDACGVK NRSKIVLVED STSLERRYTE MRKNARMQRA HRAVSTISLD VDKLADQVTT MEKYIRNGNK VAEVQITTLI ELLMRQAIRL DSISAEGDAS
201: SQRNLQAKRV QKCVETLDVL KVSNTKLKPV VVTTKWETFD PPTTTQWEYF E

Best Arabidopsis Sequence Match ( AT5G07220.1 )
(BLAST)

001: MMKMNTGTSP SVIGGGTSGN EWESRPGGMV VQRRTDQNSD VPRVFRVRVK YGSVYHEINI NSQSSFGELK KMLSDQVGLH HEDMKVLYKD KERDSKMFLD
101: LCGVKDRSKL VVKEDPISQE KRLLAKRKNA AIEKASKSIS DISFEVDRLA GQVSAFETVI NKGGKVEEKS LVNLIEMLMN QLLRLDAIIA DGDVKLMRKM
201: QVQRVQKYVE ALDLLKVKNS AKKVEVNKSV RHKPQTQTRF EQRDLLSFVE EEEEEPRNSN ASSSSGTPAV VASKWEMFDS ASTAKAAETV KPVPPRFKWE
301: FFD

Arabidopsis Description

BAG3BAG family molecular chaperone regulator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYP4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.