Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90634 | Canola | cytosol | 85.15 | 88.64 |
| CDX73692 | Canola | cytosol | 63.32 | 54.92 |
| CDX78039 | Canola | cytosol | 62.45 | 54.79 |
| AT3G51780.1 | Thale cress | cytosol | 63.32 | 53.9 |
| VIT_04s0044g02000.t01 | Wine grape | cytosol, peroxisome, plastid | 27.07 | 51.24 |
| VIT_08s0058g00130.t01 | Wine grape | cytosol | 43.67 | 44.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.05 | 39.5 |
| Zm00001d012460_P001 | Maize | cytosol | 41.48 | 39.42 |
| Zm00001d042985_P001 | Maize | cytosol, extracellular | 42.79 | 37.84 |
| EES01703 | Sorghum | cytosol | 42.79 | 37.84 |
| KRH65641 | Soybean | nucleus | 38.43 | 35.2 |
| HORVU3Hr1G087700.1 | Barley | cytosol | 39.74 | 35.14 |
| TraesCS3A01G350700.1 | Wheat | cytosol | 40.61 | 34.7 |
| KRH49429 | Soybean | cytosol | 38.43 | 34.65 |
| KRH75994 | Soybean | cytosol | 37.99 | 34.39 |
| Os01t0831200-01 | Rice | cytosol | 39.3 | 34.35 |
| TraesCS3D01G344700.1 | Wheat | cytosol | 40.17 | 34.33 |
| TraesCS3B01G383300.1 | Wheat | cytosol | 40.17 | 34.33 |
| GSMUA_Achr4P16720_001 | Banana | cytosol | 30.57 | 32.71 |
| Solyc10g085290.1.1 | Tomato | cytosol | 38.86 | 25.5 |
| CDX91068 | Canola | cytosol, mitochondrion | 16.16 | 22.98 |
| CDX85601 | Canola | cytosol, mitochondrion | 15.72 | 22.5 |
| CDX70560 | Canola | cytosol, mitochondrion | 15.72 | 22.09 |
| CDY38897 | Canola | cytosol | 31.0 | 21.65 |
| CDX70017 | Canola | cytosol | 28.82 | 21.5 |
| CDY68101 | Canola | cytosol | 30.57 | 21.47 |
| CDX98996 | Canola | cytosol | 28.38 | 21.24 |
| CDY30694 | Canola | cytosol | 27.51 | 21.21 |
| CDY30692 | Canola | cytosol | 27.51 | 21.21 |
| CDY67495 | Canola | cytosol | 30.13 | 21.1 |
| CDY27085 | Canola | cytosol | 30.13 | 21.1 |
| PGSC0003DMT400028657 | Potato | cytosol | 38.43 | 20.0 |
| CDX78574 | Canola | cytosol, mitochondrion | 14.41 | 19.88 |
| CDY09848 | Canola | cytosol | 11.35 | 19.55 |
| CDY70267 | Canola | cytosol, mitochondrion, plastid | 12.66 | 17.9 |
| CDY36367 | Canola | plastid | 12.66 | 17.9 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:19.1.5.5 | Gene3D:3.10.20.90 | GO:A0A078GU70 | UniProt:A0A078GU70 | InterPro:BAG_dom_sf |
| InterPro:BAG_domain | EnsemblPlants:CDY29046 | ProteinID:CDY29046 | ProteinID:CDY29046.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0051087 | EnsemblPlantsGene:GSBRNA2T00041784001 | InterPro:IPR000626 | InterPro:IPR003103 |
| InterPro:IPR036533 | PFAM:PF02179 | PFscan:PS50053 | PFscan:PS51035 | PANTHER:PTHR12329 | PANTHER:PTHR12329:SF21 |
| SMART:SM00264 | SUPFAM:SSF54236 | SUPFAM:SSF63491 | UniParc:UPI0004EE22B9 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g32520DBnaC07g32520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU70]
Coordinates
chrLK032229:-:312948..314882
Molecular Weight (calculated)
24815.9 Da
IEP (calculated)
4.420
GRAVY (calculated)
-0.375
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHSTDDDSE LEVRPVPVQQ RDDSASSSDS RPLHDPDSAS AVSSHTISIT VSHGSSDHHL HVPDHATFGD LKKAFVLETV LEASDMNILF WGDEKDDAEQ
101: LQAAGVTDGS NVVLVEEPNN GVDHVEPPPV MTEEIAKAIS AVLAVSGEVD ELSDRVGALE AAVDGGTIVA VKEFDMAAEL LMRQLLKLDG IKADGEARVQ
201: RKAEVRRIQK LQEDVDTLKA RCYRAKPQL
101: LQAAGVTDGS NVVLVEEPNN GVDHVEPPPV MTEEIAKAIS AVLAVSGEVD ELSDRVGALE AAVDGGTIVA VKEFDMAAEL LMRQLLKLDG IKADGEARVQ
201: RKAEVRRIQK LQEDVDTLKA RCYRAKPQL
001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD
Arabidopsis Description
BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.