Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G082590.15 | |
| HORVU6Hr1G053250.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51780.1 | HORVU2Hr1G082590.15 | AT4G24690.1 | 21798944 |
| AT3G51780.1 | HORVU6Hr1G053250.1 | AT4G24690.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G383300.1 | Wheat | cytosol | 94.98 | 91.79 |
| TraesCS3D01G344700.1 | Wheat | cytosol | 94.21 | 91.04 |
| TraesCS3A01G350700.1 | Wheat | cytosol | 94.21 | 91.04 |
| EES01703 | Sorghum | cytosol | 83.78 | 83.78 |
| Zm00001d042985_P001 | Maize | cytosol, extracellular | 83.4 | 83.4 |
| Zm00001d012460_P001 | Maize | cytosol | 74.9 | 80.5 |
| Os01t0831200-01 | Rice | cytosol | 81.08 | 80.15 |
| VIT_08s0058g00130.t01 | Wine grape | cytosol | 51.74 | 60.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.21 | 60.08 |
| VIT_06s0004g06960.t01 | Wine grape | cytosol | 51.35 | 55.88 |
| VIT_04s0044g02000.t01 | Wine grape | cytosol, peroxisome, plastid | 25.1 | 53.72 |
| KRH65641 | Soybean | nucleus | 51.74 | 53.6 |
| KRH75994 | Soybean | cytosol | 51.35 | 52.57 |
| KRH49429 | Soybean | cytosol | 51.35 | 52.36 |
| CDX78039 | Canola | cytosol | 52.51 | 52.11 |
| Bra006876.1-P | Field mustard | cytosol | 52.51 | 51.52 |
| CDX73692 | Canola | cytosol | 52.51 | 51.52 |
| KRH72721 | Soybean | cytosol | 52.51 | 50.75 |
| AT3G51780.1 | Thale cress | cytosol | 50.58 | 48.7 |
| GSMUA_Achr4P16720_001 | Banana | cytosol | 40.15 | 48.6 |
| Solyc06g007240.2.1 | Tomato | cytosol | 48.26 | 44.96 |
| PGSC0003DMT400052944 | Potato | cytosol | 47.49 | 44.24 |
| CDX90634 | Canola | cytosol | 35.52 | 41.82 |
| Bra012837.1-P | Field mustard | cytosol | 35.52 | 41.82 |
| CDY29046 | Canola | cytosol | 35.14 | 39.74 |
| Solyc10g085290.1.1 | Tomato | cytosol | 52.51 | 38.97 |
| HORVU2Hr1G103610.3 | Barley | cytosol, mitochondrion | 27.41 | 35.5 |
| HORVU2Hr1G103670.2 | Barley | cytosol | 35.52 | 34.98 |
| HORVU6Hr1G053980.1 | Barley | mitochondrion | 21.24 | 34.38 |
| HORVU2Hr1G083680.2 | Barley | cytosol, mitochondrion, plastid | 22.01 | 33.73 |
| HORVU2Hr1G083660.1 | Barley | plastid | 22.01 | 33.53 |
| HORVU3Hr1G081400.3 | Barley | mitochondrion | 19.69 | 31.1 |
| PGSC0003DMT400028657 | Potato | cytosol | 52.12 | 30.68 |
| HORVU7Hr1G056700.2 | Barley | cytosol | 38.22 | 30.65 |
| HORVU5Hr1G080500.1 | Barley | cytosol | 39.0 | 28.94 |
| HORVU7Hr1G010230.1 | Barley | mitochondrion | 35.91 | 26.05 |
| HORVU5Hr1G080560.1 | Barley | peroxisome | 26.25 | 24.37 |
| HORVU2Hr1G083700.4 | Barley | plastid | 21.62 | 24.24 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:19.1.5.5 | Gene3D:3.10.20.90 | InterPro:BAG_dom_sf | InterPro:BAG_domain | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009791 | GO:GO:0010228 | GO:GO:0051087 |
| EnsemblPlantsGene:HORVU3Hr1G087700 | EnsemblPlants:HORVU3Hr1G087700.1 | InterPro:IPR000626 | InterPro:IPR003103 | InterPro:IPR036533 | UniProt:M0YLI2 |
| PFAM:PF00240 | PFAM:PF02179 | PFscan:PS50053 | PFscan:PS51035 | PANTHER:PTHR12329 | PANTHER:PTHR12329:SF21 |
| SMART:SM00213 | SMART:SM00264 | SUPFAM:SSF54236 | SUPFAM:SSF63491 | UniParc:UPI00029674C9 | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_dom | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:622000294..622003927
Molecular Weight (calculated)
28931.5 Da
IEP (calculated)
5.564
GRAVY (calculated)
-0.562
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGTRSGAR EAEGEWEVRP GGMLVQRRDG EEGPTVRLRV SHGPVLRDVF VPPQATFGEL KRVLAQTTGL EPERQRLFFR GKEKRDNEFL HASGAKDGAK
101: LLLLEKHVPA NVEQKVEPVM MDESMMRACE AVVRVRSEVD KLSAKVCELE KNVLAGRKVE DKEFVVLTEL LMVQLLKLDG IEAEGEARAQ RKAEVRRVQN
201: LVETLDKLKA RNANPFSDSA KAVSVSTEWE TFENGMGSLN APPARFSSTQ NDTDWEQFD
101: LLLLEKHVPA NVEQKVEPVM MDESMMRACE AVVRVRSEVD KLSAKVCELE KNVLAGRKVE DKEFVVLTEL LMVQLLKLDG IEAEGEARAQ RKAEVRRVQN
201: LVETLDKLKA RNANPFSDSA KAVSVSTEWE TFENGMGSLN APPARFSSTQ NDTDWEQFD
001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD
Arabidopsis Description
BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.