Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G194400.1 | Wheat | mitochondrion | 89.38 | 88.82 |
| TraesCS6B01G240800.1 | Wheat | mitochondrion | 90.0 | 87.8 |
| TraesCS6A01G211300.1 | Wheat | mitochondrion | 83.75 | 84.81 |
| Zm00001d050988_P001 | Maize | mitochondrion | 69.38 | 76.03 |
| Os02t0597700-00 | Rice | mitochondrion | 79.38 | 75.6 |
| EES05371 | Sorghum | mitochondrion | 75.0 | 74.53 |
| Zm00001d017107_P001 | Maize | mitochondrion | 76.25 | 73.94 |
| HORVU2Hr1G083680.2 | Barley | cytosol, mitochondrion, plastid | 74.38 | 70.41 |
| HORVU2Hr1G083660.1 | Barley | plastid | 71.88 | 67.65 |
| GSMUA_Achr6P06780_001 | Banana | cytosol, mitochondrion | 61.25 | 64.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.5 | 60.93 |
| VIT_14s0219g00210.t01 | Wine grape | cytosol | 54.38 | 59.18 |
| PGSC0003DMT400017936 | Potato | mitochondrion | 45.62 | 57.48 |
| HORVU3Hr1G081400.3 | Barley | mitochondrion | 55.62 | 54.27 |
| KRG93982 | Soybean | cytosol, mitochondrion | 53.12 | 53.46 |
| KRG94376 | Soybean | cytosol, mitochondrion | 51.88 | 53.21 |
| KRH07081 | Soybean | cytosol, mitochondrion | 51.88 | 52.87 |
| Solyc02g093610.2.1 | Tomato | mitochondrion | 49.38 | 51.63 |
| HORVU2Hr1G083700.4 | Barley | plastid | 74.38 | 51.52 |
| CDX85601 | Canola | cytosol, mitochondrion | 50.0 | 50.0 |
| PGSC0003DMT400032912 | Potato | mitochondrion | 48.75 | 50.0 |
| CDX91068 | Canola | cytosol, mitochondrion | 50.0 | 49.69 |
| Bra023460.1-P | Field mustard | cytosol, mitochondrion | 49.38 | 49.38 |
| AT5G14360.1 | Thale cress | cytosol, mitochondrion | 49.38 | 48.47 |
| CDX70560 | Canola | cytosol, mitochondrion | 49.38 | 48.47 |
| Bra006251.1-P | Field mustard | cytosol, mitochondrion | 49.38 | 48.47 |
| CDX78574 | Canola | cytosol, mitochondrion | 46.25 | 44.58 |
| CDY36367 | Canola | plastid | 44.38 | 43.83 |
| Bra025558.1-P | Field mustard | cytosol, mitochondrion, plastid | 44.38 | 43.83 |
| CDY70267 | Canola | cytosol, mitochondrion, plastid | 44.38 | 43.83 |
| AT5G40630.1 | Thale cress | cytosol, mitochondrion, plastid | 42.5 | 41.21 |
| CDY09848 | Canola | cytosol | 32.5 | 39.1 |
| HORVU3Hr1G087700.1 | Barley | cytosol | 34.38 | 21.24 |
| HORVU2Hr1G103670.2 | Barley | cytosol | 31.25 | 19.01 |
| HORVU7Hr1G056700.2 | Barley | cytosol | 33.12 | 16.41 |
| HORVU5Hr1G080500.1 | Barley | cytosol | 34.38 | 15.76 |
| HORVU2Hr1G103610.3 | Barley | cytosol, mitochondrion | 19.38 | 15.5 |
| HORVU7Hr1G010230.1 | Barley | mitochondrion | 33.12 | 14.85 |
| HORVU5Hr1G080560.1 | Barley | peroxisome | 22.5 | 12.9 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G053980.1 | EnsemblPlantsGene:HORVU6Hr1G053980 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF178 | PFAM:PF00240 |
| PFscan:PS50053 | SEG:seg | SUPFAM:SSF54236 | UniParc:UPI000B481615 | UniProt:A0A287U7G3 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr6H:+:339761366..339764358
Molecular Weight (calculated)
17581.5 Da
IEP (calculated)
10.787
GRAVY (calculated)
-0.266
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKLRYSKRL FKRSSWSMAS AGGGHGNVAG GVTGGGEIEW EVRPGGMLVQ KRDAGRAEEV ILVRVSTGFS WHDVSIGATR TFGELKVMLS VVTGLEPREQ
101: RLLFKGKERE DTDHLHMVGV SNKDKVLLLE DPALKDMKLR AARAVAAQAV QSPRQPFIKV
101: RLLFKGKERE DTDHLHMVGV SNKDKVLLLE DPALKDMKLR AARAVAAQAV QSPRQPFIKV
001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
Arabidopsis Description
At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.