Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 6
- cytosol 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050988_P001 | Maize | mitochondrion | 71.43 | 82.19 |
| EES05371 | Sorghum | mitochondrion | 78.57 | 81.99 |
| TraesCS6D01G194400.1 | Wheat | mitochondrion | 76.19 | 79.5 |
| HORVU6Hr1G053980.1 | Barley | mitochondrion | 75.6 | 79.38 |
| Zm00001d017107_P001 | Maize | mitochondrion | 77.38 | 78.79 |
| TraesCS6B01G240800.1 | Wheat | mitochondrion | 76.79 | 78.66 |
| TraesCS6A01G211300.1 | Wheat | mitochondrion | 71.43 | 75.95 |
| GSMUA_Achr6P06780_001 | Banana | cytosol, mitochondrion | 61.31 | 67.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.52 | 66.23 |
| VIT_14s0219g00210.t01 | Wine grape | cytosol | 55.95 | 63.95 |
| PGSC0003DMT400017936 | Potato | mitochondrion | 46.43 | 61.42 |
| KRG93982 | Soybean | cytosol, mitochondrion | 55.36 | 58.49 |
| PGSC0003DMT400032912 | Potato | mitochondrion | 51.19 | 55.13 |
| Solyc02g093610.2.1 | Tomato | mitochondrion | 50.0 | 54.9 |
| KRH07081 | Soybean | cytosol, mitochondrion | 51.19 | 54.78 |
| KRG94376 | Soybean | cytosol, mitochondrion | 50.6 | 54.49 |
| CDX85601 | Canola | cytosol, mitochondrion | 50.0 | 52.5 |
| CDX91068 | Canola | cytosol, mitochondrion | 50.0 | 52.17 |
| Bra023460.1-P | Field mustard | cytosol, mitochondrion | 49.4 | 51.88 |
| Bra006251.1-P | Field mustard | cytosol, mitochondrion | 50.0 | 51.53 |
| CDX70560 | Canola | cytosol, mitochondrion | 50.0 | 51.53 |
| AT5G14360.1 | Thale cress | cytosol, mitochondrion | 49.4 | 50.92 |
| CDX78574 | Canola | cytosol, mitochondrion | 46.43 | 46.99 |
| Os01t0907200-00 | Rice | mitochondrion | 53.57 | 45.92 |
| CDY36367 | Canola | plastid | 41.67 | 43.21 |
| CDY70267 | Canola | cytosol, mitochondrion, plastid | 41.67 | 43.21 |
| Bra025558.1-P | Field mustard | cytosol, mitochondrion, plastid | 41.67 | 43.21 |
| AT5G40630.1 | Thale cress | cytosol, mitochondrion, plastid | 41.67 | 42.42 |
| CDY09848 | Canola | cytosol | 33.33 | 42.11 |
| Os01t0831200-01 | Rice | cytosol | 34.52 | 22.14 |
| Os08t0546100-00 | Rice | cytosol | 32.74 | 17.41 |
| Os09t0524800-01 | Rice | cytosol, mitochondrion | 32.74 | 16.47 |
| Os06t0126500-01 | Rice | cytosol | 32.74 | 16.22 |
| Os04t0619900-00 | Rice | cytosol | 19.64 | 9.4 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.2 | EntrezGene:4329871 | ProteinID:BAD21631.1 | ProteinID:BAD22119.1 | ProteinID:BAF09241.1 |
| ProteinID:BAS79565.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000626 | EnsemblPlantsGene:Os02g0597700 |
| EnsemblPlants:Os02t0597700-00 | PFAM:PF00240 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF178 | UniProt:Q6K5J0 |
| SUPFAM:SSF54236 | UniParc:UPI0000377C5D | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | RefSeq:XP_015624271.1 | SEG:seg |
Description
Ubiquitin domain containing protein. (Os02t0597700-00)
Coordinates
chr2:+:23228826..23230766
Molecular Weight (calculated)
17973.9 Da
IEP (calculated)
10.422
GRAVY (calculated)
-0.202
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKLRYSKRL FKRSCSSSKA TACVGGGGGG HGNAVAAGGG GGGAGEIGWE VRPGGMLVQK REGRGGEEVI LVRVSTGFAW HDVSIAATST FGELKVRLSM
101: VTGLEPREQR LLFRGKERED TDHLHMVGVR DKDKVLLLED PALKDMKVRA ALAAARVMQS PCQPFIQV
101: VTGLEPREQR LLFRGKERED TDHLHMVGVR DKDKVLLLED PALKDMKVRA ALAAARVMQS PCQPFIQV
001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
Arabidopsis Description
At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.