Factsheet for Bra023460.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85601	Canola	cytosol, mitochondrion	99.38	99.38
CDX91068	Canola	cytosol, mitochondrion	98.12	97.52
Bra006251.1-P	Field mustard	cytosol, mitochondrion	91.88	90.18
AT5G14360.1	Thale cress	cytosol, mitochondrion	91.25	89.57
CDY09848	Canola	cytosol	69.38	83.46
VIT_14s0219g00210.t01	Wine grape	cytosol	58.12	63.27
PGSC0003DMT400017936	Potato	mitochondrion	47.5	59.84
KRH07081	Soybean	cytosol, mitochondrion	57.5	58.6
KRG94376	Soybean	cytosol, mitochondrion	56.88	58.33
KRG93982	Soybean	cytosol, mitochondrion	56.88	57.23
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	51.25	53.95
GSMUA_AchrUn_...	Banana	cytosol	48.75	51.66
Solyc02g093610.2.1	Tomato	mitochondrion	49.38	51.63
Zm00001d050988_P001	Maize	mitochondrion	46.25	50.68
PGSC0003DMT400032912	Potato	mitochondrion	49.38	50.64
EES05371	Sorghum	mitochondrion	50.62	50.31
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	50.62	50.0
TraesCS6D01G194400.1	Wheat	mitochondrion	50.0	49.69
Os02t0597700-00	Rice	mitochondrion	51.88	49.4
HORVU6Hr1G053980.1	Barley	mitochondrion	49.38	49.38
TraesCS6B01G240800.1	Wheat	mitochondrion	50.0	48.78
TraesCS6A01G211300.1	Wheat	mitochondrion	47.5	48.1
Zm00001d017107_P001	Maize	mitochondrion	49.38	47.88
EES11012	Sorghum	mitochondrion	46.25	46.84
EES11013	Sorghum	mitochondrion	46.88	46.3
TraesCS2D01G341100.1	Wheat	mitochondrion	48.12	45.56
OQU88071	Sorghum	mitochondrion	45.62	45.34
TraesCS2D01G340900.1	Wheat	mitochondrion	48.12	45.29
Zm00001d042449_P001	Maize	mitochondrion	46.25	45.12
TraesCS2A01G321700.1	Wheat	mitochondrion	47.5	44.97
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	47.5	44.97
HORVU2Hr1G083660.1	Barley	plastid	47.5	44.71
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	46.88	44.38
Zm00001d003264_P001	Maize	mitochondrion	46.25	44.31
TraesCS2B01G360600.1	Wheat	mitochondrion	46.88	43.86
TraesCS3A01G390600.1	Wheat	mitochondrion	44.38	43.83
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	46.25	43.79
TraesCS2A01G322100.1	Wheat	mitochondrion	46.25	43.53
HORVU3Hr1G081400.3	Barley	mitochondrion	44.38	43.29
TraesCS2A01G321800.1	Wheat	mitochondrion	46.25	43.27
TraesCS3B01G422400.1	Wheat	mitochondrion	43.75	43.21
TraesCS3A01G390300.1	Wheat	mitochondrion	43.12	42.59
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	46.25	42.53
TraesCS3B01G422300.1	Wheat	mitochondrion	42.5	41.98
TraesCS3D01G382600.1	Wheat	mitochondrion	42.5	41.98
TraesCS3D01G383000.1	Wheat	mitochondrion	43.12	41.82
TraesCS3D01G383200.1	Wheat	mitochondrion	42.5	41.72
TraesCS3D01G382700.1	Wheat	mitochondrion	42.5	41.72
Zm00001d012109_P001	Maize	mitochondrion	43.12	41.57
TraesCS3D01G382800.1	Wheat	mitochondrion	42.5	41.21
TraesCS3A01G390400.1	Wheat	mitochondrion	41.25	40.74
TraesCS3A01G390500.1	Wheat	mitochondrion	41.88	40.61
Os01t0907200-00	Rice	mitochondrion	45.0	36.73
OQU80203	Sorghum	mitochondrion	34.38	35.95
EES14399	Sorghum	cytosol	34.38	35.03
HORVU2Hr1G083700.4	Barley	plastid	48.12	33.33
Bra006876.1-P	Field mustard	cytosol	28.12	17.05
Bra012837.1-P	Field mustard	cytosol	23.12	16.82
Bra029288.1-P	Field mustard	cytosol	28.12	15.15
Bra009283.1-P	Field mustard	cytosol, plastid	28.75	14.98
Bra029142.1-P	Field mustard	cytosol	30.62	14.94
Bra022577.1-P	Field mustard	cytosol	29.38	13.43

Protein Annotations

EnsemblPlants:Bra023460.1	EnsemblPlants:Bra023460.1-P	EnsemblPlantsGene:Bra023460	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF91
PFAM:PF00240	PFscan:PS50053	SEG:seg	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI0002543563
UniProt:M4E3V7	MapMan:35.2	:	:	:	:

Description

AT5G14360 (E=8e-073) | ubiquitin family protein

Coordinates

chrA02:+:3451747..3452495

Molecular Weight (calculated)

18256.0 Da

IEP (calculated)

9.994

GRAVY (calculated)

-0.591

Length

160 amino acids

Sequence
(BLAST)

001: MMRFKSKRFG IRFGFGKRTN NKGTQQDQQQ KGFGNNNNSS SSNYEIKWEL RPGGMLVQKR QESIGEDLIS IRVSTFAHFH DLSIEATSTF GELKMVLALL
101: TGLEPKQQRL LFKGKEREDD EYLHMVGVGE KDKVLLLEDP AFKEKKLLNN ISTSCPTIIV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.