Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU80203 Sorghum mitochondrion 56.05 57.52
OQU88071 Sorghum mitochondrion 45.86 44.72
Zm00001d012109_P001 Maize mitochondrion 43.31 40.96
PGSC0003DMT400017936 Potato mitochondrion 33.12 40.94
VIT_14s0219g00210.t01 Wine grape cytosol 37.58 40.14
GSMUA_Achr6P06780_001 Banana cytosol, mitochondrion 38.85 40.13
HORVU3Hr1G081400.3 Barley mitochondrion 41.4 39.63
GSMUA_AchrUn_... Banana cytosol 37.58 39.07
TraesCS3A01G390600.1 Wheat mitochondrion 40.13 38.89
TraesCS3D01G382800.1 Wheat mitochondrion 40.76 38.79
TraesCS3D01G383200.1 Wheat mitochondrion 40.13 38.65
EES11012 Sorghum mitochondrion 38.85 38.61
EES05371 Sorghum mitochondrion 39.49 38.51
TraesCS3B01G422400.1 Wheat mitochondrion 39.49 38.27
TraesCS3A01G390500.1 Wheat mitochondrion 40.13 38.18
TraesCS3D01G383000.1 Wheat mitochondrion 40.13 38.18
TraesCS3A01G390400.1 Wheat mitochondrion 38.85 37.65
TraesCS3D01G382600.1 Wheat mitochondrion 38.85 37.65
TraesCS3D01G382700.1 Wheat mitochondrion 38.85 37.42
TraesCS3A01G390300.1 Wheat mitochondrion 38.22 37.04
EES11013 Sorghum mitochondrion 38.22 37.04
TraesCS3B01G422300.1 Wheat mitochondrion 38.22 37.04
Solyc02g093610.2.1 Tomato mitochondrion 35.67 36.6
KRG93982 Soybean cytosol, mitochondrion 36.94 36.48
KRG94376 Soybean cytosol, mitochondrion 35.67 35.9
PGSC0003DMT400032912 Potato mitochondrion 35.67 35.9
Os01t0907200-00 Rice mitochondrion 44.59 35.71
KRH07081 Soybean cytosol, mitochondrion 35.03 35.03
CDX91068 Canola cytosol, mitochondrion 35.67 34.78
Bra023460.1-P Field mustard cytosol, mitochondrion 35.03 34.38
CDX85601 Canola cytosol, mitochondrion 35.03 34.38
Bra006251.1-P Field mustard cytosol, mitochondrion 35.03 33.74
CDX70560 Canola cytosol, mitochondrion 35.03 33.74
AT5G14360.1 Thale cress cytosol, mitochondrion 34.39 33.13
Bra025558.1-P Field mustard cytosol, mitochondrion, plastid 31.85 30.86
CDY70267 Canola cytosol, mitochondrion, plastid 31.85 30.86
CDY36367 Canola plastid 31.85 30.86
CDX78574 Canola cytosol, mitochondrion 31.85 30.12
CDY09848 Canola cytosol 24.84 29.32
AT5G40630.1 Thale cress cytosol, mitochondrion, plastid 29.94 28.48
EES01703 Sorghum cytosol 31.85 19.3
EES14129 Sorghum cytosol 33.12 15.81
EES11441 Sorghum cytosol 26.11 15.07
KXG36034 Sorghum cytosol 31.85 15.06
EER87751 Sorghum cytosol 31.21 14.12
Protein Annotations
Gene3D:3.10.20.90MapMan:35.2UniProt:C5YLX4EnsemblPlants:EES14399ProteinID:EES14399ProteinID:EES14399.3
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000626PFAM:PF00240PFscan:PS50053
PANTHER:PTHR10666PANTHER:PTHR10666:SF115EnsemblPlantsGene:SORBI_3007G012001SUPFAM:SSF54236unigene:Sbi.20411UniParc:UPI000B8B9FB5
InterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_domSEG:seg:::
Description
hypothetical protein
Coordinates
chr7:+:1107190..1108029
Molecular Weight (calculated)
17396.2 Da
IEP (calculated)
9.686
GRAVY (calculated)
0.034
Length
157 amino acids
Sequence
(BLAST)
001: MLLQKWRSPE DDAAAVEYIL MIVSTGSRWH DVSIHATGTF GDQKVMLSLV TGLWPSEQRL LFKGKEIDNC EHLHMVGVQD NDKVLLLEDL AVKERKLRLV
101: AAVHAVAHRG LVSAVHVVTQ RRLVAAAHAV TRRRLPAATA YAIAQHKLIT AATHTDT
Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)
001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV
Arabidopsis Description
At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.