Factsheet for TraesCS3D01G383000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G390500.1	Wheat	mitochondrion	96.36	96.36
TraesCS3D01G382800.1	Wheat	mitochondrion	95.15	95.15
TraesCS3B01G422400.1	Wheat	mitochondrion	93.33	95.06
TraesCS3A01G390400.1	Wheat	mitochondrion	93.33	95.06
TraesCS3D01G383200.1	Wheat	mitochondrion	93.33	94.48
TraesCS3D01G382600.1	Wheat	mitochondrion	89.7	91.36
HORVU3Hr1G081400.3	Barley	mitochondrion	90.3	90.85
TraesCS3D01G382700.1	Wheat	mitochondrion	89.7	90.8
Zm00001d042449_P001	Maize	mitochondrion	84.24	84.76
OQU88071	Sorghum	mitochondrion	81.21	83.23
Zm00001d012109_P001	Maize	mitochondrion	78.79	78.31
Os01t0907200-00	Rice	mitochondrion	78.79	66.33
TraesCS6D01G194400.1	Wheat	mitochondrion	54.55	55.9
GSMUA_AchrUn_...	Banana	cytosol	50.3	54.97
TraesCS2D01G341100.1	Wheat	mitochondrion	54.55	53.25
TraesCS2D01G340900.1	Wheat	mitochondrion	53.94	52.35
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	47.88	51.97
VIT_14s0219g00210.t01	Wine grape	cytosol	43.64	48.98
PGSC0003DMT400017936	Potato	mitochondrion	36.36	47.24
OQU80203	Sorghum	mitochondrion	43.03	46.41
KRH07081	Soybean	cytosol, mitochondrion	43.64	45.86
KRG94376	Soybean	cytosol, mitochondrion	43.03	45.51
KRG93982	Soybean	cytosol, mitochondrion	43.64	45.28
Solyc02g093610.2.1	Tomato	mitochondrion	40.61	43.79
CDX85601	Canola	cytosol, mitochondrion	42.42	43.75
PGSC0003DMT400032912	Potato	mitochondrion	41.21	43.59
CDX91068	Canola	cytosol, mitochondrion	42.42	43.48
Bra023460.1-P	Field mustard	cytosol, mitochondrion	41.82	43.12
CDX70560	Canola	cytosol, mitochondrion	42.42	42.94
Bra006251.1-P	Field mustard	cytosol, mitochondrion	42.42	42.94
AT5G14360.1	Thale cress	cytosol, mitochondrion	41.82	42.33
EES14399	Sorghum	cytosol	38.18	40.13
CDX78574	Canola	cytosol, mitochondrion	39.39	39.16
CDY70267	Canola	cytosol, mitochondrion, plastid	35.15	35.8
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	35.15	35.8
CDY36367	Canola	plastid	35.15	35.8
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	35.76	35.76
CDY09848	Canola	cytosol	27.88	34.59
TraesCS2D01G464700.1	Wheat	cytosol	33.94	20.82
TraesCS3D01G344700.1	Wheat	cytosol	30.3	18.66
TraesCS7D01G270100.1	Wheat	cytosol	30.3	15.48
TraesCS7D01G050300.1	Wheat	cytosol	27.27	13.31
TraesCS5D01G319300.2	Wheat	cytosol	27.88	13.11

Protein Annotations

EnsemblPlants:TraesCS3D01G383000.1	EnsemblPlantsGene:TraesCS3D01G383000	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF115	PFAM:PF00240
PFscan:PS50053	SEG:seg	SUPFAM:SSF54236	TIGR:cd01812	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:498423188..498423685

Molecular Weight (calculated)

18309.2 Da

IEP (calculated)

8.003

GRAVY (calculated)

-0.284

Length

165 amino acids

Sequence
(BLAST)

001: MVKIPSPRRL FRSRSRNTVG GIGGVDMCAM VAEHERIEWE VRPGGMLVQK RRAPHDDGCD DAVEAILVRV SAGCGGWQHD VSIDATATFG DLKVLLSLAT
101: GLWPREQRLL YRGRERDDGD HLHMAGVQDK DKVLLLEDPA VTQRKLRSTS LAQLMGVPCH SFIQV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.