CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042449_P001	Maize	mitochondrion	93.79	92.07
TraesCS3B01G422400.1	Wheat	mitochondrion	84.47	83.95
TraesCS3D01G382600.1	Wheat	mitochondrion	83.23	82.72
TraesCS3B01G422300.1	Wheat	mitochondrion	82.61	82.1
TraesCS3A01G390600.1	Wheat	mitochondrion	82.61	82.1
TraesCS3D01G383200.1	Wheat	mitochondrion	82.61	81.6
TraesCS3A01G390300.1	Wheat	mitochondrion	81.99	81.48
TraesCS3D01G383000.1	Wheat	mitochondrion	83.23	81.21
TraesCS3D01G382800.1	Wheat	mitochondrion	83.23	81.21
TraesCS3D01G382700.1	Wheat	mitochondrion	81.99	80.98
TraesCS3A01G390500.1	Wheat	mitochondrion	82.61	80.61
TraesCS3A01G390400.1	Wheat	mitochondrion	80.75	80.25
HORVU3Hr1G081400.3	Barley	mitochondrion	81.37	79.88
Os01t0907200-00	Rice	mitochondrion	85.09	69.9
EES05371	Sorghum	mitochondrion	58.39	58.39
EES11012	Sorghum	mitochondrion	57.14	58.23
GSMUA_AchrUn_...	Banana	cytosol	54.04	57.62
EES11013	Sorghum	mitochondrion	56.52	56.17
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	51.55	54.61
VIT_14s0219g00210.t01	Wine grape	cytosol	49.69	54.42
PGSC0003DMT400017936	Potato	mitochondrion	40.99	51.97
Solyc02g093610.2.1	Tomato	mitochondrion	49.07	51.63
OQU80203	Sorghum	mitochondrion	48.45	50.98
PGSC0003DMT400032912	Potato	mitochondrion	49.07	50.64
KRG93982	Soybean	cytosol, mitochondrion	49.69	50.31
KRG94376	Soybean	cytosol, mitochondrion	48.45	50.0
KRH07081	Soybean	cytosol, mitochondrion	47.83	49.04
CDX85601	Canola	cytosol, mitochondrion	45.96	46.25
Bra006251.1-P	Field mustard	cytosol, mitochondrion	46.58	46.01
CDX70560	Canola	cytosol, mitochondrion	46.58	46.01
CDX91068	Canola	cytosol, mitochondrion	45.96	45.96
EES14399	Sorghum	cytosol	44.72	45.86
Bra023460.1-P	Field mustard	cytosol, mitochondrion	45.34	45.62
AT5G14360.1	Thale cress	cytosol, mitochondrion	44.72	44.17
CDX78574	Canola	cytosol, mitochondrion	43.48	42.17
CDY70267	Canola	cytosol, mitochondrion, plastid	41.61	41.36
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	41.61	41.36
CDY36367	Canola	plastid	41.61	41.36
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	42.24	41.21
CDY09848	Canola	cytosol	29.19	35.34
EES01703	Sorghum	cytosol	36.02	22.39
EES11441	Sorghum	cytosol	33.54	19.85
KXG36034	Sorghum	cytosol	32.3	15.66
EES14129	Sorghum	cytosol	31.06	15.2
EER87751	Sorghum	cytosol	30.43	14.12

Protein Annotations

EnsemblPlants:OQU88071	EnsemblPlantsGene:SORBI_3003G394400	EntrezGene:8056138	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF115
PFAM:PF00240	PFscan:PS50053	ProteinID:EES01924.1	ProteinID:OQU88071	ProteinID:OQU88071.1	RefSeq:XP_002456804.1
SEG:seg	SUPFAM:SSF54236	UniParc:UPI0001A850A6	UniProt:C5XFI0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr3:+:70519047..70520318

Molecular Weight (calculated)

18297.2 Da

IEP (calculated)

8.505

GRAVY (calculated)

-0.287

Length

161 amino acids

Sequence
(BLAST)

001: MVKIPSPRRL FRSRSRSTAT SVGSADICAM VAEHEKIEWE VRPGGMLVQK RRSPEEDAAA VEYILVRVST GWQWHDVSID ATATFGDLKV MLSLVTGLWP
101: REQRLLYRGK ERDDCEHLHM VGVQDKDKVL LLEDPAIKER KLRSTTLAQL MGVPCHSFIQ V

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.