CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018265_P001	Maize	cytosol	85.84	91.05
Zm00001d035816_P001	Maize	cytosol, plastid	44.28	88.55
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	40.96	85.0
Os09t0524800-01	Rice	cytosol, mitochondrion	85.24	84.73
Zm00001d006173_P001	Maize	cytosol	88.55	84.24
HORVU5Hr1G080500.1	Barley	cytosol	78.31	74.5
EES14129	Sorghum	cytosol	73.49	74.16
TraesCS5A01G312500.1	Wheat	cytosol	75.6	73.82
TraesCS5D01G319300.2	Wheat	cytosol	77.11	72.93
TraesCS5B01G313500.1	Wheat	cytosol	77.41	72.6
GSMUA_Achr3P12380_001	Banana	cytosol	53.01	64.47
GSMUA_Achr3P14600_001	Banana	cytosol	56.63	63.73
GSMUA_Achr4P19700_001	Banana	cytosol	47.89	62.11
GSMUA_Achr1P07950_001	Banana	cytosol	54.22	60.61
HORVU5Hr1G080560.1	Barley	peroxisome	49.7	59.14
GSMUA_Achr1P18860_001	Banana	cytosol	48.49	56.69
GSMUA_Achr7P05880_001	Banana	cytosol	55.12	55.96
EER87751	Sorghum	cytosol	53.92	51.59
Bra009283.1-P	Field mustard	cytosol, plastid	44.88	48.53
CDX70017	Canola	cytosol	44.88	48.53
KRH09137	Soybean	cytosol	44.88	48.53
CDX98996	Canola	cytosol	44.58	48.37
KRH38607	Soybean	cytosol	49.1	47.94
KRH38609	Soybean	cytosol, plastid	49.7	46.74
KRH09139	Soybean	cytosol, plastid	49.7	46.61
AT5G07220.1	Thale cress	cytosol	42.47	46.53
PGSC0003DMT400065070	Potato	cytosol	46.39	46.39
VIT_16s0100g00470.t01	Wine grape	cytosol	47.59	46.06
Solyc06g035720.2.1	Tomato	cytosol	45.78	46.06
Solyc03g026220.2.1	Tomato	cytosol	46.08	44.87
CDY30694	Canola	cytosol	40.06	44.78
CDY30692	Canola	cytosol	40.06	44.78
Bra029288.1-P	Field mustard	cytosol	40.06	44.78
PGSC0003DMT400037124	Potato	cytosol	45.78	44.57
CDY38897	Canola	cytosol	43.98	44.51
Bra029142.1-P	Field mustard	cytosol	43.98	44.51
CDY68101	Canola	cytosol	43.67	44.48
CDY67495	Canola	cytosol	43.37	44.04
AT5G62100.1	Thale cress	cytosol	39.16	43.92
CDY27085	Canola	cytosol	43.07	43.73
KRH57254	Soybean	cytosol	35.84	43.27
PGSC0003DMT400058588	Potato	cytosol	36.45	42.76
Solyc08g080320.2.1	Tomato	cytosol, plastid	35.54	42.75
KRH03982	Soybean	cytosol	35.24	42.7
AT5G52060.1	Thale cress	cytosol	43.98	42.69
EES01703	Sorghum	cytosol	32.53	41.7
EES11441	Sorghum	cytosol	34.04	41.54
Bra022577.1-P	Field mustard	cytosol	43.37	41.14
EES11012	Sorghum	mitochondrion	17.47	36.71
KRH35375	Soybean	cytosol	28.92	35.56
EES11013	Sorghum	mitochondrion	17.17	35.19
KRH44514	Soybean	cytosol, plastid	19.28	34.41
EES05371	Sorghum	mitochondrion	16.57	34.16
OQU88071	Sorghum	mitochondrion	15.66	32.3
EES14399	Sorghum	cytosol	15.06	31.85
OQU80203	Sorghum	mitochondrion	11.45	24.84

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	UniProt:A0A1B6QDP7	InterPro:BAG_dom_sf	InterPro:BAG_domain
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103
InterPro:IPR036533	EnsemblPlants:KXG36034	ProteinID:KXG36034	ProteinID:KXG36034.1	PFAM:PF00240	PFAM:PF02179
PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF30	SMART:SM00264	EnsemblPlantsGene:SORBI_3002G270000
SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI0001C80DD3	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:65378009..65384075

Molecular Weight (calculated)

35937.0 Da

IEP (calculated)

10.365

GRAVY (calculated)

-0.489

Length

332 amino acids

Sequence
(BLAST)

001: MMRARPKGTF ADAMRESSPP PAPASAAAAA AVKEDEWEVR PGGMLVQKRS PDADAPAGAP VPTIRVKVKF NGVYHEIYIN SQASFGELKK LLSARTGLHP
101: EDQKLVYKDK ERDSKAFLDM AGVKDRSKMV LLEDPAAQAK RLLEQRRTDK AERAAKSISR ISLDVDKLAT KVSALETIVS KGGKVVDADV VTLTEALMNE
201: LVKLDSIAAE GEVKVQRRMQ EKRVQKYVET LDAIRAKNAA AAAPKANGNM NGHAKPRAPH LPPRPPPVSQ RRNFQQQPSP APPTQSWESF DLLSSVPSTS
301: SAAVTTTMAA ATTTSPAGAS PSPIPRFDWE LF

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.