CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003264_P001	Maize	mitochondrion	83.54	79.04
EES11013	Sorghum	mitochondrion	81.01	79.01
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	83.54	78.11
TraesCS2A01G322100.1	Wheat	mitochondrion	83.54	77.65
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	82.28	76.92
TraesCS2A01G321700.1	Wheat	mitochondrion	82.28	76.92
TraesCS2B01G360600.1	Wheat	mitochondrion	82.91	76.61
TraesCS2D01G340900.1	Wheat	mitochondrion	82.28	76.47
TraesCS2D01G341100.1	Wheat	mitochondrion	81.65	76.33
HORVU2Hr1G083660.1	Barley	plastid	81.65	75.88
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	80.38	75.15
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	82.28	74.71
TraesCS2A01G321800.1	Wheat	mitochondrion	80.38	74.27
EES05371	Sorghum	mitochondrion	71.52	70.19
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	60.76	63.16
GSMUA_AchrUn_...	Banana	cytosol	60.13	62.91
VIT_14s0219g00210.t01	Wine grape	cytosol	55.7	59.86
OQU88071	Sorghum	mitochondrion	58.23	57.14
HORVU2Hr1G083700.4	Barley	plastid	82.91	56.71
PGSC0003DMT400017936	Potato	mitochondrion	45.57	56.69
Solyc02g093610.2.1	Tomato	mitochondrion	53.8	55.56
KRG93982	Soybean	cytosol, mitochondrion	55.7	55.35
PGSC0003DMT400032912	Potato	mitochondrion	52.53	53.21
KRH07081	Soybean	cytosol, mitochondrion	51.9	52.23
KRG94376	Soybean	cytosol, mitochondrion	50.63	51.28
CDX85601	Canola	cytosol, mitochondrion	47.47	46.88
AT5G14360.1	Thale cress	cytosol, mitochondrion	48.1	46.63
CDX91068	Canola	cytosol, mitochondrion	47.47	46.58
Bra023460.1-P	Field mustard	cytosol, mitochondrion	46.84	46.25
CDX70560	Canola	cytosol, mitochondrion	47.47	46.01
Bra006251.1-P	Field mustard	cytosol, mitochondrion	47.47	46.01
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	46.2	45.06
CDY70267	Canola	cytosol, mitochondrion, plastid	46.2	45.06
CDY36367	Canola	plastid	46.2	45.06
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	45.57	43.64
CDX78574	Canola	cytosol, mitochondrion	44.3	42.17
OQU80203	Sorghum	mitochondrion	39.24	40.52
EES14399	Sorghum	cytosol	38.61	38.85
CDY09848	Canola	cytosol	30.38	36.09
EES01703	Sorghum	cytosol	41.77	25.48
EES11441	Sorghum	cytosol	34.18	19.85
KXG36034	Sorghum	cytosol	36.71	17.47
EES14129	Sorghum	cytosol	34.81	16.72
EER87751	Sorghum	cytosol	31.65	14.41

Protein Annotations

EnsemblPlants:EES11012	EnsemblPlantsGene:SORBI_3006G125100	EntrezGene:8060160	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF178
PFAM:PF00240	PFscan:PS50053	ProteinID:EES11012	ProteinID:EES11012.1	RefSeq:XP_002446684.1	SEG:seg
SUPFAM:SSF54236	UniParc:UPI0001A86FBF	UniProt:C5YAV6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr6:+:49049619..49051446

Molecular Weight (calculated)

17583.3 Da

IEP (calculated)

9.631

GRAVY (calculated)

-0.293

Length

158 amino acids

Sequence
(BLAST)

001: MIKLRYPKKL FRRSSSKGST TSSSSDGDAG SVRGGGEIEW EVRPGGMLVQ KRDCRADVEV ITVRVATGFS WHDVSVVATC TFGELKVVLS MVTGLEPREQ
101: RLLFRGKERE DSDHLHMIGV RDMDKVLLLE DPALKDMKLR AGLTAQAVQS PYQTFIKV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.