Factsheet for TraesCS2A01G321900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G321700.1	Wheat	mitochondrion	93.49	93.49
TraesCS2A01G321800.1	Wheat	mitochondrion	92.9	91.81
HORVU2Hr1G083660.1	Barley	plastid	92.31	91.76
TraesCS2A01G322100.1	Wheat	mitochondrion	91.72	91.18
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	89.35	86.78
EES11012	Sorghum	mitochondrion	75.15	80.38
EES11013	Sorghum	mitochondrion	76.33	79.63
Zm00001d003264_P001	Maize	mitochondrion	68.64	69.46
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	61.54	68.42
TraesCS6A01G211300.1	Wheat	mitochondrion	62.72	67.09
HORVU2Hr1G083700.4	Barley	plastid	90.53	66.23
GSMUA_AchrUn_...	Banana	cytosol	57.99	64.9
VIT_14s0219g00210.t01	Wine grape	cytosol	53.85	61.9
PGSC0003DMT400017936	Potato	mitochondrion	43.2	57.48
Solyc02g093610.2.1	Tomato	mitochondrion	50.89	56.21
TraesCS3A01G390600.1	Wheat	mitochondrion	53.85	56.17
PGSC0003DMT400032912	Potato	mitochondrion	51.48	55.77
KRG93982	Soybean	cytosol, mitochondrion	52.07	55.35
TraesCS3A01G390300.1	Wheat	mitochondrion	52.07	54.32
KRH07081	Soybean	cytosol, mitochondrion	49.7	53.5
TraesCS3A01G390500.1	Wheat	mitochondrion	52.07	53.33
TraesCS3A01G390400.1	Wheat	mitochondrion	50.89	53.09
KRG94376	Soybean	cytosol, mitochondrion	48.52	52.56
CDX85601	Canola	cytosol, mitochondrion	45.56	48.12
AT5G14360.1	Thale cress	cytosol, mitochondrion	46.15	47.85
CDX91068	Canola	cytosol, mitochondrion	45.56	47.83
Bra023460.1-P	Field mustard	cytosol, mitochondrion	44.97	47.5
CDX70560	Canola	cytosol, mitochondrion	45.56	47.24
Bra006251.1-P	Field mustard	cytosol, mitochondrion	45.56	47.24
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	43.2	45.06
CDY36367	Canola	plastid	43.2	45.06
CDY70267	Canola	cytosol, mitochondrion, plastid	43.2	45.06
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	43.2	44.24
CDX78574	Canola	cytosol, mitochondrion	43.2	43.98
CDY09848	Canola	cytosol	28.4	36.09
TraesCS2A01G463500.1	Wheat	cytosol	31.36	19.7
TraesCS3A01G350700.1	Wheat	cytosol	30.18	19.03
TraesCS7A01G269600.2	Wheat	cytosol	31.36	16.41
TraesCS7A01G055400.1	Wheat	mitochondrion	30.18	14.78
TraesCS5A01G312500.1	Wheat	cytosol	29.59	14.71
TraesCS4A01G442100.1	Wheat	mitochondrion	30.18	14.53

Protein Annotations

EnsemblPlants:TraesCS2A01G321900.1	EnsemblPlantsGene:TraesCS2A01G321900	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF178	PFAM:PF00240
PFscan:PS50053	SEG:seg	SUPFAM:SSF54236	TIGR:cd01812	MapMan:35.1	:

Description

No Description!

Coordinates

chr2A:-:551461825..551463147

Molecular Weight (calculated)

18664.4 Da

IEP (calculated)

9.653

GRAVY (calculated)

-0.458

Length

169 amino acids

Sequence
(BLAST)

001: MMKLRCPNPK RLFRKSSSKI SRSSSSCSSS SDNGSDASGI RGGGGSGEIE WELRPGGMLV QRRDGRGDVE VITVRVATGY SWHEVSIGAT CTFDELKVVV
101: SMVTGLEPRE QRLLFRGKER EDSDHLHMVG VRDKDKVLLL EDPALKDIKL RATLAGQAMQ SPYHTFIKV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.