CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006251.1-P	Field mustard	cytosol, mitochondrion	94.58	96.32
CDX70560	Canola	cytosol, mitochondrion	93.98	95.71
CDX85601	Canola	cytosol, mitochondrion	85.54	88.75
CDX91068	Canola	cytosol, mitochondrion	84.94	87.58
AT5G14360.1	Thale cress	cytosol, mitochondrion	83.13	84.66
CDY09848	Canola	cytosol	61.45	76.69
VIT_14s0219g00210.t01	Wine grape	cytosol	52.41	59.18
PGSC0003DMT400017936	Potato	mitochondrion	42.77	55.91
KRH07081	Soybean	cytosol, mitochondrion	51.81	54.78
KRG94376	Soybean	cytosol, mitochondrion	51.2	54.49
KRG93982	Soybean	cytosol, mitochondrion	50.6	52.83
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	45.78	50.0
GSMUA_AchrUn_...	Banana	cytosol	45.18	49.67
Solyc02g093610.2.1	Tomato	mitochondrion	45.18	49.02
PGSC0003DMT400032912	Potato	mitochondrion	45.78	48.72
Zm00001d050988_P001	Maize	mitochondrion	41.57	47.26
EES05371	Sorghum	mitochondrion	45.78	47.2
TraesCS6D01G194400.1	Wheat	mitochondrion	45.18	46.58
Os02t0597700-00	Rice	mitochondrion	46.99	46.43
HORVU6Hr1G053980.1	Barley	mitochondrion	44.58	46.25
TraesCS6B01G240800.1	Wheat	mitochondrion	45.18	45.73
CDY70267	Canola	cytosol, mitochondrion, plastid	44.58	45.68
CDY36367	Canola	plastid	44.58	45.68
TraesCS6A01G211300.1	Wheat	mitochondrion	42.77	44.94
Zm00001d017107_P001	Maize	mitochondrion	44.58	44.85
EES11013	Sorghum	mitochondrion	43.37	44.44
EES11012	Sorghum	mitochondrion	42.17	44.3
OQU88071	Sorghum	mitochondrion	42.17	43.48
Zm00001d042449_P001	Maize	mitochondrion	42.77	43.29
TraesCS2D01G341100.1	Wheat	mitochondrion	43.98	43.2
TraesCS2A01G321900.1	Wheat	cytosol, mitochondrion, plastid	43.98	43.2
TraesCS2D01G340900.1	Wheat	mitochondrion	43.98	42.94
TraesCS2A01G321700.1	Wheat	mitochondrion	43.37	42.6
HORVU2Hr1G083660.1	Barley	plastid	43.37	42.35
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	42.77	42.01
TraesCS2B01G360600.1	Wheat	mitochondrion	42.77	41.52
TraesCS2B01G360700.1	Wheat	cytosol, mitochondrion	42.17	41.42
Zm00001d003264_P001	Maize	mitochondrion	41.57	41.32
TraesCS2A01G322100.1	Wheat	mitochondrion	42.17	41.18
TraesCS2A01G321800.1	Wheat	mitochondrion	42.17	40.94
HORVU3Hr1G081400.3	Barley	mitochondrion	40.36	40.85
TraesCS3B01G422400.1	Wheat	mitochondrion	39.76	40.74
TraesCS3A01G390600.1	Wheat	mitochondrion	39.76	40.74
Zm00001d012109_P001	Maize	mitochondrion	40.36	40.36
TraesCS2A01G322000.1	Wheat	cytosol, mitochondrion, plastid	42.17	40.23
TraesCS3A01G390300.1	Wheat	mitochondrion	39.16	40.12
TraesCS3D01G382600.1	Wheat	mitochondrion	38.55	39.51
TraesCS3B01G422300.1	Wheat	mitochondrion	38.55	39.51
TraesCS3D01G383000.1	Wheat	mitochondrion	39.16	39.39
TraesCS3D01G382700.1	Wheat	mitochondrion	38.55	39.26
TraesCS3D01G383200.1	Wheat	mitochondrion	38.55	39.26
TraesCS3D01G382800.1	Wheat	mitochondrion	38.55	38.79
TraesCS3A01G390400.1	Wheat	mitochondrion	37.35	38.27
TraesCS3A01G390500.1	Wheat	mitochondrion	37.95	38.18
Os01t0907200-00	Rice	mitochondrion	42.17	35.71
OQU80203	Sorghum	mitochondrion	30.12	32.68
EES14399	Sorghum	cytosol	30.12	31.85
HORVU2Hr1G083700.4	Barley	plastid	43.98	31.6
CDX78039	Canola	cytosol	24.7	15.71
CDX90634	Canola	cytosol	20.48	15.45
CDX73692	Canola	cytosol	24.1	15.15
CDX98996	Canola	cytosol	27.71	15.03
CDX70017	Canola	cytosol	27.71	14.98
CDY38897	Canola	cytosol	29.52	14.94
CDY30692	Canola	cytosol	26.51	14.81
CDY30694	Canola	cytosol	26.51	14.81
CDY68101	Canola	cytosol	28.92	14.72
CDY67495	Canola	cytosol	28.92	14.68
CDY29046	Canola	cytosol	19.88	14.41
CDY27085	Canola	cytosol	28.31	14.37

Protein Annotations

EnsemblPlants:CDX78574	EnsemblPlantsGene:GSBRNA2T00129984001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF91	PFAM:PF00240
PFscan:PS50053	ProteinID:CDX78574	ProteinID:CDX78574.1	SEG:seg	SUPFAM:SSF54236	UniParc:UPI0004EEF323
MapMan:35.2	:	:	:	:	:

Description

BnaA03g04860D

Coordinates

chrLK031815:+:1357353..1359607

Molecular Weight (calculated)

19045.2 Da

IEP (calculated)

10.310

GRAVY (calculated)

-0.725

Length

166 amino acids

Sequence
(BLAST)

001: MMKFKSKRFG IRFGFGKRTN NKGTQQDQQQ KGLGNSNNNI SCCNNEIKWE LRPGGMLVQK RQESIGDDLI SIRVSTFANF HDLSIEKKKK KNDGRELKMV
101: LSLLTGLEPK QQRLLFKGKE REDDEYLHMV GVGEKDKVLL LEDPAFKEKK LLDRNNISAS CLTIIV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.