Factsheet for TraesCS2D01G341100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G340900.1	Wheat	mitochondrion	93.49	92.94
HORVU2Hr1G083680.2	Barley	cytosol, mitochondrion, plastid	91.72	91.72
EES11012	Sorghum	mitochondrion	76.33	81.65
EES11013	Sorghum	mitochondrion	76.33	79.63
TraesCS6D01G194400.1	Wheat	mitochondrion	67.46	70.81
Zm00001d003264_P001	Maize	mitochondrion	69.82	70.66
GSMUA_Achr6P06780_001	Banana	cytosol, mitochondrion	60.95	67.76
GSMUA_AchrUn_...	Banana	cytosol	58.58	65.56
VIT_14s0219g00210.t01	Wine grape	cytosol	53.25	61.22
PGSC0003DMT400017936	Potato	mitochondrion	43.79	58.27
KRG93982	Soybean	cytosol, mitochondrion	52.07	55.35
TraesCS3D01G382700.1	Wheat	mitochondrion	53.25	55.21
TraesCS3D01G383200.1	Wheat	mitochondrion	53.25	55.21
TraesCS3D01G382600.1	Wheat	mitochondrion	52.66	54.94
TraesCS3D01G383000.1	Wheat	mitochondrion	53.25	54.55
TraesCS3D01G382800.1	Wheat	mitochondrion	52.66	53.94
PGSC0003DMT400032912	Potato	mitochondrion	49.7	53.85
Solyc02g093610.2.1	Tomato	mitochondrion	48.52	53.59
KRH07081	Soybean	cytosol, mitochondrion	49.7	53.5
KRG94376	Soybean	cytosol, mitochondrion	48.52	52.56
CDX85601	Canola	cytosol, mitochondrion	46.15	48.75
AT5G14360.1	Thale cress	cytosol, mitochondrion	46.75	48.47
CDX91068	Canola	cytosol, mitochondrion	46.15	48.45
Bra023460.1-P	Field mustard	cytosol, mitochondrion	45.56	48.12
Bra006251.1-P	Field mustard	cytosol, mitochondrion	46.15	47.85
CDX70560	Canola	cytosol, mitochondrion	46.15	47.85
CDY70267	Canola	cytosol, mitochondrion, plastid	43.2	45.06
CDY36367	Canola	plastid	43.2	45.06
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	43.2	45.06
CDX78574	Canola	cytosol, mitochondrion	43.2	43.98
AT5G40630.1	Thale cress	cytosol, mitochondrion, plastid	42.6	43.64
CDY09848	Canola	cytosol	29.59	37.59
TraesCS2D01G464700.1	Wheat	cytosol	32.54	20.45
TraesCS3D01G344700.1	Wheat	cytosol	30.77	19.4
TraesCS7D01G270100.1	Wheat	cytosol	32.54	17.03
TraesCS7D01G050300.1	Wheat	cytosol	30.18	15.09
TraesCS5D01G319300.2	Wheat	cytosol	30.77	14.81

Protein Annotations

EnsemblPlants:TraesCS2D01G341100.1	EnsemblPlantsGene:TraesCS2D01G341100	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF178	PFAM:PF00240
PFscan:PS50053	SEG:seg	SUPFAM:SSF54236	TIGR:cd01812	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:+:435221900..435224907

Molecular Weight (calculated)

18536.2 Da

IEP (calculated)

9.698

GRAVY (calculated)

-0.432

Length

169 amino acids

Sequence
(BLAST)

001: MMKLRCPNPK RLFRRSSSKI SRSSSSCSSS SDNGSDAGGI RGAGGSGEIE WEVRPGGMLV QRRDGRGDVE VITVRVATGY SWHDVSIGAT CTFGELKVAV
101: SMVTGLEPRE QRLLFRGKER EDSDHLHMVG VRDKDKVLLL EDPALKDIKL RSALAGQAVQ SPYRTFIEV

Best Arabidopsis Sequence Match ( AT5G14360.1 )
(BLAST)

001: MMKFKTKRFG IRFGFGKRIN NKGTQQDQQQ KGVGNNNNNS SCSNCEIKWE LRPGGMLVQK RQESIGEDLI SIRVSTFAHF HDLSIEATST FGELKMVLSL
101: LTGLEPKQQR LVFKGKERED HEYLHMVGVG DKDKVLLLED PGFKDKKLLD LNSISTTCPT IIV

Arabidopsis Description

At5g14360 [Source:UniProtKB/TrEMBL;Acc:Q9LY93]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.