Factsheet for TraesCS5D01G319300.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6D01G402500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07220.1	TraesCS6D01G402500.1	AT5G02500.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G312500.1	Wheat	cytosol	92.88	95.88
TraesCS5B01G313500.1	Wheat	cytosol	96.01	95.2
HORVU5Hr1G080500.1	Barley	cytosol	90.31	90.83
Zm00001d021221_P001	Maize	cytosol	74.36	78.14
KXG36034	Sorghum	cytosol	72.93	77.11
Os09t0524800-01	Rice	cytosol, mitochondrion	72.65	76.35
Zm00001d035816_P001	Maize	cytosol, plastid	35.33	74.7
Zm00001d018265_P001	Maize	cytosol	66.1	74.12
Zm00001d045103_P001	Maize	nucleus, peroxisome, plastid	32.76	71.88
Zm00001d006173_P001	Maize	cytosol	68.09	68.48
TraesCS7D01G270100.1	Wheat	cytosol	62.39	67.8
HORVU5Hr1G080560.1	Barley	peroxisome	49.57	62.37
GSMUA_Achr3P12380_001	Banana	cytosol	47.01	60.44
GSMUA_Achr1P07950_001	Banana	cytosol	49.0	57.91
GSMUA_Achr3P14600_001	Banana	cytosol	48.15	57.29
GSMUA_Achr4P19700_001	Banana	cytosol	41.03	56.25
GSMUA_Achr1P18860_001	Banana	cytosol	43.3	53.52
GSMUA_Achr7P05880_001	Banana	cytosol	47.86	51.38
KRH09137	Soybean	cytosol	41.03	46.91
KRH38607	Soybean	cytosol	44.73	46.18
TraesCS7D01G050300.1	Wheat	cytosol	44.16	45.86
VIT_16s0100g00470.t01	Wine grape	cytosol	44.44	45.48
CDX70017	Canola	cytosol	39.6	45.28
Bra009283.1-P	Field mustard	cytosol, plastid	39.6	45.28
CDX98996	Canola	cytosol	39.32	45.1
KRH09139	Soybean	cytosol, plastid	45.3	44.92
AT5G07220.1	Thale cress	cytosol	38.75	44.88
KRH38609	Soybean	cytosol, plastid	44.73	44.48
PGSC0003DMT400065070	Potato	cytosol	41.6	43.98
Solyc06g035720.2.1	Tomato	cytosol	41.31	43.94
Bra029142.1-P	Field mustard	cytosol	40.74	43.6
CDY38897	Canola	cytosol	40.74	43.6
CDY68101	Canola	cytosol	40.46	43.56
Solyc08g080320.2.1	Tomato	cytosol, plastid	34.19	43.48
PGSC0003DMT400037124	Potato	cytosol	42.17	43.4
Solyc03g026220.2.1	Tomato	cytosol	41.6	42.82
CDY67495	Canola	cytosol	39.89	42.81
CDY30694	Canola	cytosol	36.18	42.76
CDY30692	Canola	cytosol	36.18	42.76
PGSC0003DMT400058588	Potato	cytosol	34.47	42.76
CDY27085	Canola	cytosol	39.6	42.51
Bra029288.1-P	Field mustard	cytosol	35.9	42.42
AT5G62100.1	Thale cress	cytosol	35.61	42.23
KRH57254	Soybean	cytosol	32.48	41.45
KRH03982	Soybean	cytosol	32.19	41.24
AT5G52060.1	Thale cress	cytosol	40.17	41.23
Bra022577.1-P	Field mustard	cytosol	40.17	40.29
TraesCS2D01G464700.1	Wheat	cytosol	30.48	39.78
TraesCS3D01G344700.1	Wheat	cytosol	28.49	37.31
KRH35375	Soybean	cytosol	25.93	33.7
KRH44514	Soybean	cytosol, plastid	17.66	33.33
TraesCS6D01G194400.1	Wheat	mitochondrion	14.53	31.68
TraesCS2D01G341100.1	Wheat	mitochondrion	14.81	30.77
TraesCS2D01G340900.1	Wheat	mitochondrion	14.81	30.59
TraesCS3D01G382600.1	Wheat	mitochondrion	13.11	28.4
TraesCS3D01G383200.1	Wheat	mitochondrion	13.11	28.22
TraesCS3D01G382700.1	Wheat	mitochondrion	13.11	28.22
TraesCS3D01G383000.1	Wheat	mitochondrion	13.11	27.88
TraesCS3D01G382800.1	Wheat	mitochondrion	12.54	26.67

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533
PFAM:PF00240	PFAM:PF02179	PFscan:PS50053	PANTHER:PTHR12329	PANTHER:PTHR12329:SF30	SUPFAM:SSF54236
SUPFAM:SSF63491	EnsemblPlantsGene:TraesCS5D01G319300	EnsemblPlants:TraesCS5D01G319300.2	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	TIGR:cd01812
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:412247670..412249048

Molecular Weight (calculated)

37881.2 Da

IEP (calculated)

10.394

GRAVY (calculated)

-0.544

Length

351 amino acids

Sequence
(BLAST)

001: MMRAKGKATF LDAMKETTSP VSPAAAKEAL KEDEWEVRPG GMLVQKRDPD SDAPAGAPVP TVRLKVKFNG VSHEIYINSQ ASFGELKKMM SEKTGLHHED
101: QKVLYKGKEM DSKAFLDMSG VKDRSKLVLL EDPDAQAKRL IEQRRADKAH RASKSVSRIS LDVDKLATKV SALEAIVRKG GKVVEADVVA LTEALMTELV
201: KLDAIAADGE VKAQRRLQEK RVQKYVETLD VIRAKNASAP TANGHAKNAA ASKANGHGNG PAKADRSLHL PPRPPPVSQR RQFKQQPAPA TGKAAAAPPT
301: ASWETFDLLS SMPSTSSATA TTTMAAATTT TKPASNNNNA SPIPRFDWEL F

Best Arabidopsis Sequence Match ( AT5G52060.1 )
(BLAST)

001: MMKMMRNKPT NLPTAGMTNG GRGSGGGGGG GGRESGGRDL EIRPGGMLVQ KRNPDLDPVG PPPPPMIRVR IKYGAVYHEI NISPQASFGE LKKMLTGPTG
101: IHHQDQKLMY KDKERDSKAF LDVSGVKDKS KMVLIEDPLS QEKRFLEMRK IAKTEKASKA ISDISLEVDR LGGRVSAFEM VTKKGGKIAE KDLVTVIELL
201: MNELIKLDAI VAEGDVKLQR KMQVKRVQNY VETLDALKVK NSMANGQQKQ SSTAQRLAPI QEHNNEERQE QKPIQSLMDM PIQYKEKKQE IEEEPRNSGE
301: GPFVLDSSAK WETFDHHPVT PLSSTTAKNN AIPPRFNWEF FD

Arabidopsis Description

BAG1BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.