Factsheet for Bra012837.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010484.1-P
Bra013825.1-P
Bra019212.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51780.1	Bra010484.1-P	AT4G24690.1	21798944
AT3G51780.1	Bra013825.1-P	AT4G24690.1	21798944
AT3G51780.1	Bra019212.1-P	AT4G24690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90634	Canola	cytosol	100.0	100.0
Bra006876.1-P	Field mustard	cytosol	69.09	57.58
AT3G51780.1	Thale cress	cytosol	67.27	55.02
VIT_04s0044g02000.t01	Wine grape	cytosol, peroxisome, plastid	27.27	49.59
VIT_08s0058g00130.t01	Wine grape	cytosol	45.45	44.84
Zm00001d012460_P001	Maize	cytosol	43.18	39.42
Zm00001d042985_P001	Maize	cytosol, extracellular	45.91	39.0
EES01703	Sorghum	cytosol	45.45	38.61
GSMUA_AchrUn_...	Banana	cytosol	41.36	38.24
KRH49429	Soybean	cytosol	42.27	36.61
KRH65641	Soybean	nucleus	40.91	36.0
HORVU3Hr1G087700.1	Barley	cytosol	41.82	35.52
KRH75994	Soybean	cytosol	40.45	35.18
Os01t0831200-01	Rice	cytosol	41.82	35.11
TraesCS3A01G350700.1	Wheat	cytosol	42.27	34.7
TraesCS3B01G383300.1	Wheat	cytosol	42.27	34.7
TraesCS3D01G344700.1	Wheat	cytosol	41.82	34.33
GSMUA_Achr4P16720_001	Banana	cytosol	31.82	32.71
Solyc10g085290.1.1	Tomato	cytosol	41.36	26.07
Bra023460.1-P	Field mustard	cytosol, mitochondrion	16.82	23.12
Bra009283.1-P	Field mustard	cytosol, plastid	31.82	22.8
Bra006251.1-P	Field mustard	cytosol, mitochondrion	16.82	22.7
Bra029142.1-P	Field mustard	cytosol	33.64	22.56
Bra029288.1-P	Field mustard	cytosol	29.55	21.89
Bra022577.1-P	Field mustard	cytosol	33.18	20.86
PGSC0003DMT400028657	Potato	cytosol	40.91	20.45
Bra025558.1-P	Field mustard	cytosol, mitochondrion, plastid	13.18	17.9

Protein Annotations

Gene3D:1.20.58.120	MapMan:19.1.5.5	Gene3D:3.10.20.90	InterPro:BAG_dom_sf	InterPro:BAG_domain	EnsemblPlantsGene:Bra012837
EnsemblPlants:Bra012837.1	EnsemblPlants:Bra012837.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051087	InterPro:IPR000626	InterPro:IPR003103	InterPro:IPR036533	UniProt:M4D8M7	PFAM:PF00240
PFAM:PF02179	PFscan:PS50053	PFscan:PS51035	PANTHER:PTHR12329	PANTHER:PTHR12329:SF21	SMART:SM00264
SUPFAM:SSF54236	SUPFAM:SSF63491	UniParc:UPI000254074F	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg

Description

AT3G51780 (E=2e-063) ATBAG4 | ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4); protein binding

Coordinates

chrA03:-:21986854..21988359

Molecular Weight (calculated)

23725.0 Da

IEP (calculated)

4.598

GRAVY (calculated)

-0.325

Length

220 amino acids

Sequence
(BLAST)

001: MMHHSTDDSE PDGAMPVQQR DDSASSSDSA SAVSNHTITI TVYHGSSDHH LHVPQHATFG DVKKALVLET GLEATDLKIL FRGDEKDDAE QLQAAGVTEG
101: SVVVLVDEPN KGVDHVEPPP VMTEEIAKAI AAVLAVSGEV DELSDRVGAL EAAVDGGTIV AVKEFDMTAE LLMRQLLKLD GIKADGEARL QRKAEVRRVQ
201: KLQEDVDTLK ARCYRAKPQL

Best Arabidopsis Sequence Match ( AT3G51780.1 )
(BLAST)

001: MMHNSTEESE WEVRPGGMLV QRRDDAASSD HKPLQDPDSA SAAFAQTIRI TVSHGSSHHD LHISAHATFG DVKKALVQKT GLEASELKIL FRGVERDDAE
101: QLQAAGVKDA SKLVVVVEDT NKRVEQQPPV VTKEMEKAIA AVNAVTGEVD KLSDRVVALE VAVNGGTQVA VREFDMAAEL LMRQLLKLDG IEAEGDAKVQ
201: RKAEVRRIQN LQEAVDKLKA RCSNPFVDQS KAAAVSTEWE SFGNGVGSLN PPPPASPSAN VTQDWEKFD

Arabidopsis Description

BAG4BAG family molecular chaperone regulator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.