Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0267900-01 | Rice | cytosol | 89.22 | 100.0 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 88.62 | 99.33 |
| Solyc10g081170.1.1 | Tomato | extracellular | 88.62 | 99.33 |
| PGSC0003DMT400046278 | Potato | cytosol | 45.51 | 98.7 |
| Bra003251.1-P | Field mustard | cytosol | 88.02 | 98.66 |
| Solyc12g099990.1.1 | Tomato | nucleus | 88.02 | 98.66 |
| PGSC0003DMT400018569 | Potato | cytosol | 88.02 | 98.66 |
| Bra020155.1-P | Field mustard | cytosol | 88.02 | 98.66 |
| Bra014671.1-P | Field mustard | cytosol | 88.02 | 98.66 |
| Solyc11g072240.1.1 | Tomato | cytosol | 88.02 | 98.66 |
| Bra006595.1-P | Field mustard | cytosol | 88.02 | 98.66 |
| Bra002368.1-P | Field mustard | cytosol | 88.02 | 98.66 |
| Bra000214.1-P | Field mustard | cytosol | 88.02 | 98.66 |
| AT5G21274.1 | Thale cress | cytosol | 88.02 | 98.66 |
| AT3G56800.1 | Thale cress | cytosol | 88.02 | 98.66 |
| Solyc10g077010.1.1 | Tomato | cytosol | 88.02 | 98.66 |
| PGSC0003DMT400070437 | Potato | cytosol | 88.02 | 98.66 |
| KRG94975 | Soybean | nucleus | 87.43 | 97.99 |
| CDY56411 | Canola | cytosol | 87.43 | 97.99 |
| CDY04474 | Canola | cytosol | 87.43 | 97.99 |
| CDY65072 | Canola | cytosol | 87.43 | 97.99 |
| Solyc01g008950.2.1 | Tomato | nucleus | 87.43 | 97.99 |
| PGSC0003DMT400058435 | Potato | cytosol | 87.43 | 97.99 |
| Bra019453.1-P | Field mustard | cytosol | 87.43 | 97.99 |
| Bra012037.1-P | Field mustard | cytosol | 87.43 | 97.99 |
| Bra007269.1-P | Field mustard | cytosol | 87.43 | 97.99 |
| CDX92401 | Canola | cytosol | 78.44 | 97.76 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 88.62 | 96.73 |
| CDY55678 | Canola | cytosol | 86.23 | 96.64 |
| Bra034981.1-P | Field mustard | cytosol | 83.83 | 96.55 |
| CDY12321 | Canola | cytosol | 83.83 | 96.55 |
| Bra025438.1-P | Field mustard | cytosol | 65.27 | 96.46 |
| PGSC0003DMT400054299 | Potato | cytosol | 65.27 | 96.46 |
| Bra004166.1-P | Field mustard | cytosol | 85.63 | 95.97 |
| CDX96148 | Canola | cytosol | 85.63 | 95.97 |
| CDY27651 | Canola | cytosol | 85.03 | 94.67 |
| CDX99690 | Canola | cytosol | 84.43 | 94.63 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 90.42 | 92.07 |
| AT2G41110.2 | Thale cress | cytosol | 88.02 | 91.3 |
| AT1G66410.2 | Thale cress | cytosol | 86.23 | 90.57 |
| KRH18664 | Soybean | cytosol | 75.45 | 90.0 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 62.28 | 85.25 |
| CDY48191 | Canola | cytosol | 89.22 | 83.24 |
| Bra034317.1-P | Field mustard | cytosol | 89.22 | 83.24 |
| CDX77060 | Canola | cytosol | 89.22 | 82.78 |
| AT5G37780.3 | Thale cress | cytosol | 86.23 | 82.29 |
| AT2G27030.3 | Thale cress | cytosol | 88.62 | 81.77 |
| CDX75970 | Canola | cytosol | 55.09 | 80.7 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 74.25 | 77.99 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 83.23 | 76.37 |
| KRG89812 | Soybean | cytosol, mitochondrion | 74.85 | 75.76 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 89.22 | 74.87 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 76.65 | 73.99 |
| CDY30947 | Canola | cytosol | 86.83 | 69.38 |
| AT3G43810.2 | Thale cress | cytosol | 88.62 | 69.16 |
| CDY57144 | Canola | cytosol | 58.08 | 66.44 |
| TraesCS5D01G392200.1 | Wheat | cytosol | 60.48 | 65.16 |
| CDY21220 | Canola | cytosol | 86.23 | 65.16 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 66.47 | 61.67 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 59.88 | 61.35 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 59.88 | 59.52 |
| AT2G41090.1 | Thale cress | cytosol | 56.29 | 49.21 |
| TraesCS7D01G313100.1 | Wheat | cytosol | 42.52 | 47.97 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 40.72 | 45.33 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 62.28 | 43.15 |
| TraesCS2D01G173900.1 | Wheat | cytosol, mitochondrion | 38.92 | 38.69 |
| TraesCS1D01G197600.1 | Wheat | cytosol | 38.92 | 33.51 |
| AT2G41100.1 | Thale cress | cytosol | 53.29 | 27.47 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 39.52 | 25.88 |
| TraesCS5D01G392100.1 | Wheat | mitochondrion, nucleus | 1.2 | 1.46 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G188600.1 | EnsemblPlantsGene:TraesCS3D01G188600 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:175404728..175408284
Molecular Weight (calculated)
19112.4 Da
IEP (calculated)
3.838
GRAVY (calculated)
-0.441
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI AEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAKD VENFVWIFLQ LYYLCTM
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAKD VENFVWIFLQ LYYLCTM
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.