Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G315300.1 | Wheat | plastid | 97.69 | 97.84 |
| TraesCS6B01G345800.1 | Wheat | plastid | 96.3 | 96.74 |
| HORVU4Hr1G080360.1 | Barley | cytosol, peroxisome, plastid | 49.85 | 94.17 |
| HORVU6Hr1G077570.1 | Barley | mitochondrion | 90.28 | 93.15 |
| HORVU4Hr1G015730.1 | Barley | cytosol, peroxisome, plastid | 47.84 | 92.81 |
| Os02t0759700-01 | Rice | cytosol | 83.8 | 85.24 |
| EES05842 | Sorghum | plastid | 83.18 | 81.42 |
| Zm00001d052188_P001 | Maize | plastid | 82.72 | 80.48 |
| Zm00001d018126_P001 | Maize | plastid | 81.33 | 79.25 |
| TraesCS7D01G177500.1 | Wheat | cytosol, plastid | 75.77 | 78.06 |
| GSMUA_Achr3P06710_001 | Banana | cytosol | 60.19 | 68.06 |
| VIT_18s0001g07120.t01 | Wine grape | cytosol | 60.8 | 66.33 |
| GSMUA_Achr5P05520_001 | Banana | cytosol | 59.41 | 65.59 |
| KRH62206 | Soybean | cytosol | 56.64 | 62.95 |
| KRH52925 | Soybean | cytosol | 56.33 | 62.18 |
| CDY03450 | Canola | cytosol | 57.1 | 60.66 |
| Bra013798.1-P | Field mustard | cytosol | 56.64 | 60.46 |
| CDY34286 | Canola | cytosol | 56.79 | 60.43 |
| PGSC0003DMT400005419 | Potato | cytosol | 57.1 | 60.36 |
| Solyc04g074980.2.1 | Tomato | cytosol | 57.87 | 60.19 |
| KRH72427 | Soybean | cytosol | 58.33 | 60.0 |
| Bra000604.1-P | Field mustard | cytosol, plastid | 56.17 | 59.97 |
| CDY21439 | Canola | cytosol | 55.86 | 59.93 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 57.56 | 59.87 |
| AT5G49980.1 | Thale cress | nucleus | 57.1 | 59.77 |
| CDX83172 | Canola | cytosol, plastid | 55.86 | 59.64 |
| KRH16819 | Soybean | cytosol | 58.49 | 59.22 |
| TraesCS4D01G301800.1 | Wheat | cytosol, nucleus, peroxisome | 53.7 | 57.05 |
| TraesCS2D01G285000.1 | Wheat | cytosol | 43.52 | 49.13 |
| TraesCS5D01G288000.1 | Wheat | cytosol | 42.75 | 48.68 |
| TraesCS1D01G099900.1 | Wheat | cytosol | 42.75 | 46.17 |
| TraesCS4D01G214200.1 | Wheat | cytosol | 27.47 | 30.38 |
| TraesCS3D01G360400.2 | Wheat | cytosol | 27.78 | 30.25 |
| TraesCS1D01G278400.1 | Wheat | cytosol | 27.47 | 30.07 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G294600.1 | EnsemblPlantsGene:TraesCS6D01G294600 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF8 | SEG:seg | SMART:SM00367 | SUPFAM:SSF52047 |
| MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:405482944..405485445
Molecular Weight (calculated)
70595.5 Da
IEP (calculated)
5.333
GRAVY (calculated)
-0.048
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPPSSSPS PAPIPQPAAT LAPAGMRGAA AEDSSGSPPS RMSEDDDDGD GAGGGDRWAP DLRGCGNGGG GGGRWAPPDQ VLENVLESVL EFLTAARDRN
101: AASLVCRSWY RAEAQTRREL FIGNCYAVSP RRAVERFGGV RAVVLKGKPR FADFSLVPHG WGANVSPWVA ALGPAYPRLE RICLKRMTVS DDELALIPKS
201: FPLFKELSLV CCDGFTTRGL AVIAEGCRHL RVLDLTEDYF HEEESEVVDW ISKFPECSTS LESLVFDCVS VPFNFEALEA LVARSPALRR LRVNDHVSIE
301: QLRRLMARAP HLTHLGTGSF RSEPGPGGAL SVSELATSFA ASRSLVCLSG FLDANAAYLP AIYQVCANLT SLNFSFAGLT DEEFIPVIRH CVNLRTLWVL
401: DTVGDEGLRA VAETCSNLRE LRVFPLDATE DSEGSVSDIG LQAISEGCRK LESILYFCQR MTNAAVIAMS ENCPDLLVFR LCIMGRHRPD RITGAPMDEG
501: FGAIVMNCKR LTRLSVSGLL TDKAFAYIGG HGKLIKTLSV AFAGNSDMSL QHVFEGCTRL QKLEVRDSPF GDKGLLSGLN YFYNMRFFWM NSCRLTVKGC
601: GDVAQQMPNL VVEVMKENEG EMDTVDKLYL YRSLAGPRED APSFVNIL
101: AASLVCRSWY RAEAQTRREL FIGNCYAVSP RRAVERFGGV RAVVLKGKPR FADFSLVPHG WGANVSPWVA ALGPAYPRLE RICLKRMTVS DDELALIPKS
201: FPLFKELSLV CCDGFTTRGL AVIAEGCRHL RVLDLTEDYF HEEESEVVDW ISKFPECSTS LESLVFDCVS VPFNFEALEA LVARSPALRR LRVNDHVSIE
301: QLRRLMARAP HLTHLGTGSF RSEPGPGGAL SVSELATSFA ASRSLVCLSG FLDANAAYLP AIYQVCANLT SLNFSFAGLT DEEFIPVIRH CVNLRTLWVL
401: DTVGDEGLRA VAETCSNLRE LRVFPLDATE DSEGSVSDIG LQAISEGCRK LESILYFCQR MTNAAVIAMS ENCPDLLVFR LCIMGRHRPD RITGAPMDEG
501: FGAIVMNCKR LTRLSVSGLL TDKAFAYIGG HGKLIKTLSV AFAGNSDMSL QHVFEGCTRL QKLEVRDSPF GDKGLLSGLN YFYNMRFFWM NSCRLTVKGC
601: GDVAQQMPNL VVEVMKENEG EMDTVDKLYL YRSLAGPRED APSFVNIL
001: MTQDRSEMSE DDDDQQSPPL DLPSTAIADP CSSSSSPNKS RNCISNSQTF PDHVLENVLE NVLQFLDSRC DRNAASLVCK SWWRVEALTR SEVFIGNCYA
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
Arabidopsis Description
AFB5AFB5 [Source:UniProtKB/TrEMBL;Acc:A0A178UB83]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.